Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 CYP21A1P-202ENST00000354927 1481 ntBASIC21.17■□□□□ 0.98
SLC1A1P43005 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC21.17■□□□□ 0.98
SLC1A1P43005 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SLC1A1P43005 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A1P43005 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC1A1P43005 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC1A1P43005 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC1A1P43005 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A1P43005 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A1P43005 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A1P43005 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A1P43005 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A1P43005 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC1A1P43005 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC1A1P43005 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
SLC1A1P43005 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC21.16■□□□□ 0.98
SLC1A1P43005 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SLC1A1P43005 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC21.16■□□□□ 0.98
SLC1A1P43005 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.16■□□□□ 0.98
SLC1A1P43005 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
SLC1A1P43005 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 BX119927.1-201ENST00000636596 1552 ntBASIC21.15■□□□□ 0.98
SLC1A1P43005 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC1A1P43005 BMP1-204ENST00000397814 836 ntTSL 4 BASIC21.15■□□□□ 0.98
SLC1A1P43005 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.15■□□□□ 0.98
SLC1A1P43005 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.15■□□□□ 0.98
SLC1A1P43005 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC1A1P43005 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC21.15■□□□□ 0.98
SLC1A1P43005 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SLC1A1P43005 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC1A1P43005 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC21.15■□□□□ 0.98
SLC1A1P43005 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
SLC1A1P43005 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
SLC1A1P43005 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SLC1A1P43005 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC21.14■□□□□ 0.98
SLC1A1P43005 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.98
SLC1A1P43005 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A1P43005 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
SLC1A1P43005 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC21.14■□□□□ 0.97
SLC1A1P43005 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A1P43005 SPI1-203ENST00000533030 661 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC1A1P43005 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A1P43005 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A1P43005 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC21.14■□□□□ 0.97
SLC1A1P43005 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A1P43005 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SLC1A1P43005 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SLC1A1P43005 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC1A1P43005 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC1A1P43005 HSCB-202ENST00000398941 955 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC1A1P43005 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC21.13■□□□□ 0.97
SLC1A1P43005 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC1A1P43005 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC21.13■□□□□ 0.97
SLC1A1P43005 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC21.13■□□□□ 0.97
SLC1A1P43005 AC087623.3-201ENST00000607047 1098 ntBASIC21.13■□□□□ 0.97
SLC1A1P43005 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SLC1A1P43005 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC21.13■□□□□ 0.97
SLC1A1P43005 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
SLC1A1P43005 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.13■□□□□ 0.97
SLC1A1P43005 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
SLC1A1P43005 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A1P43005 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A1P43005 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A1P43005 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A1P43005 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC1A1P43005 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A1P43005 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.12■□□□□ 0.97
SLC1A1P43005 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A1P43005 AC137761.2-201ENST00000561729 223 ntBASIC21.12■□□□□ 0.97
SLC1A1P43005 AC145350.3-201ENST00000569033 163 ntBASIC21.12■□□□□ 0.97
SLC1A1P43005 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.12■□□□□ 0.97
SLC1A1P43005 AC016405.3-201ENST00000607710 860 ntBASIC21.12■□□□□ 0.97
SLC1A1P43005 AC100791.3-201ENST00000617619 330 ntBASIC21.12■□□□□ 0.97
SLC1A1P43005 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A1P43005 LBX2-AS1-202ENST00000603175 2083 ntBASIC21.12■□□□□ 0.97
SLC1A1P43005 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SLC1A1P43005 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 76.8 ms