Protein–RNA interactions for Protein: P39023

RPL3, 60S ribosomal protein L3, humanhuman

Known RBP Predictions only

Length 403 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL3P39023 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
RPL3P39023 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
RPL3P39023 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 BMP1-204ENST00000397814 836 ntTSL 4 BASIC19.18■□□□□ 0.66
RPL3P39023 AC137761.2-201ENST00000561729 223 ntBASIC19.18■□□□□ 0.66
RPL3P39023 AC145350.3-201ENST00000569033 163 ntBASIC19.18■□□□□ 0.66
RPL3P39023 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RPL3P39023 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
RPL3P39023 TCF3P1-201ENST00000423021 1937 ntBASIC19.17■□□□□ 0.66
RPL3P39023 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.17■□□□□ 0.66
RPL3P39023 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
RPL3P39023 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.17■□□□□ 0.66
RPL3P39023 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RPL3P39023 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19.17■□□□□ 0.66
RPL3P39023 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 STX7-201ENST00000367937 1090 ntTSL 5 BASIC19.17■□□□□ 0.66
RPL3P39023 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 SPI1-203ENST00000533030 661 ntTSL 2 BASIC19.17■□□□□ 0.66
RPL3P39023 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.17■□□□□ 0.66
RPL3P39023 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
RPL3P39023 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
RPL3P39023 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 CYP21A1P-202ENST00000354927 1481 ntBASIC19.16■□□□□ 0.66
RPL3P39023 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.16■□□□□ 0.66
RPL3P39023 FGF2-202ENST00000608478 3880 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.16■□□□□ 0.66
RPL3P39023 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC19.16■□□□□ 0.66
RPL3P39023 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RPL3P39023 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.16■□□□□ 0.66
RPL3P39023 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.16■□□□□ 0.66
RPL3P39023 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.16■□□□□ 0.66
RPL3P39023 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC19.16■□□□□ 0.66
RPL3P39023 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
RPL3P39023 AIRN-201ENST00000601203 4374 ntBASIC19.16■□□□□ 0.66
RPL3P39023 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPL3P39023 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC19.15■□□□□ 0.66
RPL3P39023 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.15■□□□□ 0.66
RPL3P39023 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPL3P39023 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC19.15■□□□□ 0.66
RPL3P39023 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPL3P39023 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
RPL3P39023 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.15■□□□□ 0.66
RPL3P39023 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPL3P39023 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.15■□□□□ 0.66
RPL3P39023 HSCB-202ENST00000398941 955 ntTSL 2 BASIC19.15■□□□□ 0.66
RPL3P39023 AC016769.1-201ENST00000409132 1010 ntBASIC19.15■□□□□ 0.66
RPL3P39023 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
RPL3P39023 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.15■□□□□ 0.66
RPL3P39023 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC19.15■□□□□ 0.66
RPL3P39023 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.15■□□□□ 0.66
RPL3P39023 AC100791.3-201ENST00000617619 330 ntBASIC19.15■□□□□ 0.66
RPL3P39023 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.15■□□□□ 0.66
RPL3P39023 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC19.15■□□□□ 0.66
RPL3P39023 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
RPL3P39023 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RPL3P39023 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.15■□□□□ 0.66
RPL3P39023 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
RPL3P39023 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RPL3P39023 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPL3P39023 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RPL3P39023 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RPL3P39023 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.14■□□□□ 0.66
RPL3P39023 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC19.14■□□□□ 0.65
RPL3P39023 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RPL3P39023 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RPL3P39023 AL391422.3-201ENST00000603791 2761 ntBASIC19.14■□□□□ 0.65
RPL3P39023 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC19.14■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms