Protein–RNA interactions for Protein: P38428

CUE1, Coupling of ubiquitin conjugation to ER degradation protein 1, yeastyeast

Predictions only

Length 203 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUE1P38428 AFR1YDR085C 1863 nt1.05□□□□□ -2.24
CUE1P38428 SPR3YGR059W 1539 nt1.05□□□□□ -2.24
CUE1P38428 QCR7YDR529C 384 nt1.04□□□□□ -2.24
CUE1P38428 SPC1YJR010C-A 285 nt1.04□□□□□ -2.24
CUE1P38428 YJR079WYJR079W 330 nt1.04□□□□□ -2.24
CUE1P38428 YLL020CYLL020C 306 nt1.04□□□□□ -2.24
CUE1P38428 YML003WYML003W 873 nt1.04□□□□□ -2.24
CUE1P38428 YNL114CYNL114C 372 nt1.04□□□□□ -2.24
CUE1P38428 YOR161W-BYOR161W-B 261 nt1.04□□□□□ -2.24
CUE1P38428 HDA3YPR179C 1968 nt1.04□□□□□ -2.24
CUE1P38428 YLR422WYLR422W 5799 nt1.04□□□□□ -2.24
CUE1P38428 RAD50YNL250W 3939 nt1.04□□□□□ -2.24
CUE1P38428 CDC39YCR093W 6327 nt1.04□□□□□ -2.24
CUE1P38428 SLX4YLR135W 2247 nt1.03□□□□□ -2.24
CUE1P38428 RTR1YER139C 681 nt1.03□□□□□ -2.24
CUE1P38428 YER188C-AYER188C-A 300 nt1.03□□□□□ -2.24
CUE1P38428 SPO13YHR014W 876 nt1.03□□□□□ -2.24
CUE1P38428 PAU2YEL049W 363 nt1.02□□□□□ -2.25
CUE1P38428 SLX9YGR081C 633 nt1.02□□□□□ -2.25
CUE1P38428 GAL7YBR018C 1101 nt1.02□□□□□ -2.25
CUE1P38428 YPR146CYPR146C 330 nt1.02□□□□□ -2.25
CUE1P38428 SWI4YER111C 3282 nt1.02□□□□□ -2.25
CUE1P38428 SEC5YDR166C 2916 nt1.01□□□□□ -2.25
CUE1P38428 YHR214C-CYHR214C-C 1437 nt1.01□□□□□ -2.25
CUE1P38428 RTT102YGR275W 474 nt1.01□□□□□ -2.25
CUE1P38428 PRP21YJL203W 843 nt1.01□□□□□ -2.25
CUE1P38428 NUT1YGL151W 3399 nt1□□□□□ -2.25
CUE1P38428 APL1YJR005W 2103 nt1□□□□□ -2.25
CUE1P38428 AFB1YLR040C 675 nt1□□□□□ -2.25
CUE1P38428 RPS18BYML026C 441 nt1□□□□□ -2.25
CUE1P38428 SLM6YBR266C 453 nt1□□□□□ -2.25
CUE1P38428 SGO1YOR073W 1773 nt1□□□□□ -2.25
CUE1P38428 YPR117WYPR117W 7470 nt1□□□□□ -2.25
CUE1P38428 VAM6YDL077C 3150 nt1□□□□□ -2.25
CUE1P38428 EAF1YDR359C 2949 nt0.99□□□□□ -2.25
CUE1P38428 UBP3YER151C 2739 nt0.99□□□□□ -2.25
CUE1P38428 YOR192C-AYOR192C-A 1317 nt0.99□□□□□ -2.25
CUE1P38428 STF2YGR008C 255 nt0.99□□□□□ -2.25
CUE1P38428 YPR099CYPR099C 357 nt0.99□□□□□ -2.25
CUE1P38428 YBR121C-AYBR121C-A 159 nt0.99□□□□□ -2.25
CUE1P38428 STB6YKL072W 2301 nt0.99□□□□□ -2.25
CUE1P38428 VPS54YDR027C 2670 nt0.99□□□□□ -2.25
CUE1P38428 YDR003W-AYDR003W-A 123 nt0.98□□□□□ -2.25
CUE1P38428 YDR509WYDR509W 348 nt0.98□□□□□ -2.25
CUE1P38428 VMA21YGR105W 234 nt0.98□□□□□ -2.25
CUE1P38428 GMC2YLR445W 567 nt0.98□□□□□ -2.25
CUE1P38428 HUG1YML058W-A 207 nt0.98□□□□□ -2.25
CUE1P38428 snR14snR14 160 nt0.98□□□□□ -2.25
CUE1P38428 YOP1YPR028W 543 nt0.98□□□□□ -2.25
CUE1P38428 CLU1YMR012W 3834 nt0.98□□□□□ -2.25
CUE1P38428 GDS1YOR355W 1569 nt0.97□□□□□ -2.25
CUE1P38428 APL3YBL037W 3078 nt0.97□□□□□ -2.25
CUE1P38428 GPM2YDL021W 936 nt0.97□□□□□ -2.25
CUE1P38428 YDR169C-AYDR169C-A 150 nt0.97□□□□□ -2.25
CUE1P38428 YFR009W-AYFR009W-A 258 nt0.97□□□□□ -2.25
CUE1P38428 tV(UAC)BtV(UAC)B 74 nt0.97□□□□□ -2.25
CUE1P38428 tV(UAC)DtV(UAC)D 74 nt0.97□□□□□ -2.25
CUE1P38428 RPL34BYIL052C 366 nt0.97□□□□□ -2.25
CUE1P38428 RPL9BYNL067W 576 nt0.97□□□□□ -2.25
CUE1P38428 YOR248WYOR248W 303 nt0.97□□□□□ -2.25
CUE1P38428 PAN3YKL025C 2040 nt0.97□□□□□ -2.25
CUE1P38428 YLL054CYLL054C 2532 nt0.97□□□□□ -2.25
CUE1P38428 SEC3YER008C 4011 nt0.97□□□□□ -2.25
CUE1P38428 YDR008CYDR008C 351 nt0.96□□□□□ -2.26
CUE1P38428 EMT1tM(CAU)D 73 nt0.96□□□□□ -2.26
CUE1P38428 EMT5tM(CAU)J1 73 nt0.96□□□□□ -2.26
CUE1P38428 EMT3tM(CAU)J2 73 nt0.96□□□□□ -2.26
CUE1P38428 EMT4tM(CAU)M 73 nt0.96□□□□□ -2.26
CUE1P38428 EMT2tM(CAU)O2 73 nt0.96□□□□□ -2.26
CUE1P38428 YIL029CYIL029C 429 nt0.96□□□□□ -2.26
CUE1P38428 NBP1YLR457C 960 nt0.96□□□□□ -2.26
CUE1P38428 DOP1YDR141C 5097 nt0.96□□□□□ -2.26
CUE1P38428 YNL284C-BYNL284C-B 5268 nt0.96□□□□□ -2.26
CUE1P38428 SIP4YJL089W 2490 nt0.96□□□□□ -2.26
CUE1P38428 SWI5YDR146C 2130 nt0.95□□□□□ -2.26
CUE1P38428 MSS11YMR164C 2277 nt0.95□□□□□ -2.26
CUE1P38428 SPT21YMR179W 2277 nt0.95□□□□□ -2.26
CUE1P38428 YKL023C-AYKL023C-A 228 nt0.95□□□□□ -2.26
CUE1P38428 COG4YPR105C 2586 nt0.94□□□□□ -2.26
CUE1P38428 SRP14YDL092W 441 nt0.94□□□□□ -2.26
CUE1P38428 APL2YKL135C 2181 nt0.94□□□□□ -2.26
CUE1P38428 ZIP1YDR285W 2628 nt0.94□□□□□ -2.26
CUE1P38428 SHE9YDR393W 1371 nt0.94□□□□□ -2.26
CUE1P38428 PIG1YLR273C 1947 nt0.93□□□□□ -2.26
CUE1P38428 HNT1YDL125C 477 nt0.93□□□□□ -2.26
CUE1P38428 HIT1YJR055W 495 nt0.93□□□□□ -2.26
CUE1P38428 YBR032WYBR032W 303 nt0.93□□□□□ -2.26
CUE1P38428 PPN1YDR452W 2025 nt0.93□□□□□ -2.26
CUE1P38428 SPT7YBR081C 3999 nt0.92□□□□□ -2.26
CUE1P38428 IRC16YPR038W 360 nt0.92□□□□□ -2.26
CUE1P38428 SPO23YBR250W 1572 nt0.91□□□□□ -2.26
CUE1P38428 NUP145YGL092W 3954 nt0.91□□□□□ -2.26
CUE1P38428 snR78snR78 87 nt0.91□□□□□ -2.26
CUE1P38428 YKL044WYKL044W 321 nt0.91□□□□□ -2.26
CUE1P38428 YBR071WYBR071W 636 nt0.91□□□□□ -2.26
CUE1P38428 TOF2YKR010C 2316 nt0.9□□□□□ -2.26
CUE1P38428 BEM2YER155C 6504 nt0.9□□□□□ -2.26
CUE1P38428 NOC3YLR002C 1992 nt0.9□□□□□ -2.26
CUE1P38428 MKT1YNL085W 2493 nt0.9□□□□□ -2.27
CUE1P38428 snR84snR84 550 nt0.9□□□□□ -2.27
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms