Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SCNN1AP37088 SMG8-203ENST00000578922 2178 ntBASIC21.09■□□□□ 0.97
SCNN1AP37088 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCNN1AP37088 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCNN1AP37088 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
SCNN1AP37088 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCNN1AP37088 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCNN1AP37088 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
SCNN1AP37088 ID1-201ENST00000376105 1233 ntBASIC21.08■□□□□ 0.97
SCNN1AP37088 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC21.08■□□□□ 0.97
SCNN1AP37088 OR2A1-AS1-201ENST00000462305 773 ntBASIC21.08■□□□□ 0.97
SCNN1AP37088 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC21.08■□□□□ 0.97
SCNN1AP37088 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
SCNN1AP37088 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC21.08■□□□□ 0.97
SCNN1AP37088 AL138781.1-201ENST00000566567 1274 ntBASIC21.08■□□□□ 0.97
SCNN1AP37088 AC133041.1-202ENST00000642053 222 ntBASIC21.08■□□□□ 0.97
SCNN1AP37088 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCNN1AP37088 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.96
SCNN1AP37088 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
SCNN1AP37088 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC21.08■□□□□ 0.96
SCNN1AP37088 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
SCNN1AP37088 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCNN1AP37088 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCNN1AP37088 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCNN1AP37088 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.07■□□□□ 0.96
SCNN1AP37088 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCNN1AP37088 AC069152.1-201ENST00000438030 544 ntBASIC21.07■□□□□ 0.96
SCNN1AP37088 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.07■□□□□ 0.96
SCNN1AP37088 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.07■□□□□ 0.96
SCNN1AP37088 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SCNN1AP37088 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCNN1AP37088 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCNN1AP37088 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
SCNN1AP37088 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.07■□□□□ 0.96
SCNN1AP37088 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
SCNN1AP37088 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCNN1AP37088 KRT8P17-201ENST00000453110 1448 ntBASIC21.06■□□□□ 0.96
SCNN1AP37088 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SCNN1AP37088 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
SCNN1AP37088 HLA-L-209ENST00000420110 1011 ntBASIC21.06■□□□□ 0.96
SCNN1AP37088 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.06■□□□□ 0.96
SCNN1AP37088 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.06■□□□□ 0.96
SCNN1AP37088 AC097658.1-201ENST00000475555 843 ntBASIC21.06■□□□□ 0.96
SCNN1AP37088 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCNN1AP37088 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
SCNN1AP37088 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SCNN1AP37088 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
SCNN1AP37088 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC21.06■□□□□ 0.96
SCNN1AP37088 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC21.06■□□□□ 0.96
SCNN1AP37088 BX119927.1-201ENST00000636596 1552 ntBASIC21.06■□□□□ 0.96
SCNN1AP37088 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC21.05■□□□□ 0.96
SCNN1AP37088 KRT8P20-201ENST00000423953 1409 ntBASIC21.05■□□□□ 0.96
SCNN1AP37088 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCNN1AP37088 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCNN1AP37088 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCNN1AP37088 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCNN1AP37088 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC21.05■□□□□ 0.96
SCNN1AP37088 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.05■□□□□ 0.96
SCNN1AP37088 SERP1-205ENST00000487153 657 ntTSL 4 BASIC21.05■□□□□ 0.96
SCNN1AP37088 BET1L-207ENST00000529614 560 ntTSL 5 BASIC21.05■□□□□ 0.96
SCNN1AP37088 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
SCNN1AP37088 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SCNN1AP37088 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.05■□□□□ 0.96
SCNN1AP37088 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SCNN1AP37088 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC21.05■□□□□ 0.96
SCNN1AP37088 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SCNN1AP37088 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC21.04■□□□□ 0.96
SCNN1AP37088 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC21.04■□□□□ 0.96
SCNN1AP37088 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC21.04■□□□□ 0.96
SCNN1AP37088 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC21.04■□□□□ 0.96
SCNN1AP37088 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.04■□□□□ 0.96
SCNN1AP37088 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 HLA-G-202ENST00000376815 851 ntBASIC21.04■□□□□ 0.96
SCNN1AP37088 HLA-G-203ENST00000376818 1127 ntBASIC21.04■□□□□ 0.96
SCNN1AP37088 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SCNN1AP37088 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC21.04■□□□□ 0.96
SCNN1AP37088 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC21.04■□□□□ 0.96
SCNN1AP37088 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.04■□□□□ 0.96
SCNN1AP37088 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC21.04■□□□□ 0.96
SCNN1AP37088 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
SCNN1AP37088 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.04■□□□□ 0.96
SCNN1AP37088 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC21.04■□□□□ 0.96
SCNN1AP37088 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC21.04■□□□□ 0.96
SCNN1AP37088 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SCNN1AP37088 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC21.04■□□□□ 0.96
SCNN1AP37088 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms