Protein–RNA interactions for Protein: P35817

BDF1, Bromodomain-containing factor 1, yeastyeast

Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDF1P35817 RPN2YIL075C 2838 nt4.36□□□□□ -1.71
BDF1P35817 HSH155YMR288W 2916 nt4.35□□□□□ -1.71
BDF1P35817 MLH2YLR035C 2088 nt4.35□□□□□ -1.71
BDF1P35817 COX12YLR038C 252 nt4.35□□□□□ -1.71
BDF1P35817 LCL1YPL056C 306 nt4.35□□□□□ -1.71
BDF1P35817 YBL100W-CYBL100W-C 120 nt4.34□□□□□ -1.71
BDF1P35817 VMA1YDL185W 3216 nt4.33□□□□□ -1.72
BDF1P35817 PUT3YKL015W 2940 nt4.33□□□□□ -1.72
BDF1P35817 YPP1YGR198W 2454 nt4.33□□□□□ -1.72
BDF1P35817 tF(GAA)DtF(GAA)D 73 nt4.33□□□□□ -1.72
BDF1P35817 tF(GAA)NtF(GAA)N 73 nt4.33□□□□□ -1.72
BDF1P35817 YLR154C-HYLR154C-H 132 nt4.33□□□□□ -1.72
BDF1P35817 YLR156C-AYLR156C-A 132 nt4.33□□□□□ -1.72
BDF1P35817 YLR157C-CYLR157C-C 132 nt4.33□□□□□ -1.72
BDF1P35817 YLR159C-AYLR159C-A 132 nt4.33□□□□□ -1.72
BDF1P35817 PMC1YGL006W 3522 nt4.32□□□□□ -1.72
BDF1P35817 YDR034C-DYDR034C-D 5313 nt4.32□□□□□ -1.72
BDF1P35817 tK(UUU)DtK(UUU)D 73 nt4.32□□□□□ -1.72
BDF1P35817 tK(UUU)G1tK(UUU)G1 73 nt4.32□□□□□ -1.72
BDF1P35817 tK(UUU)G2tK(UUU)G2 73 nt4.32□□□□□ -1.72
BDF1P35817 tK(UUU)KtK(UUU)K 73 nt4.32□□□□□ -1.72
BDF1P35817 tK(UUU)LtK(UUU)L 73 nt4.32□□□□□ -1.72
BDF1P35817 tK(UUU)OtK(UUU)O 73 nt4.32□□□□□ -1.72
BDF1P35817 tK(UUU)PtK(UUU)P 73 nt4.32□□□□□ -1.72
BDF1P35817 HMI1YOL095C 2121 nt4.32□□□□□ -1.72
BDF1P35817 FAS2YPL231W 5664 nt4.32□□□□□ -1.72
BDF1P35817 YGL182CYGL182C 324 nt4.31□□□□□ -1.72
BDF1P35817 YNL114CYNL114C 372 nt4.31□□□□□ -1.72
BDF1P35817 ORC1YML065W 2745 nt4.31□□□□□ -1.72
BDF1P35817 YIL080WYIL080W 4722 nt4.31□□□□□ -1.72
BDF1P35817 PKH1YDR490C 2301 nt4.3□□□□□ -1.72
BDF1P35817 KAP95YLR347C 2586 nt4.3□□□□□ -1.72
BDF1P35817 TCO89YPL180W 2400 nt4.3□□□□□ -1.72
BDF1P35817 UBP14YBR058C 2346 nt4.3□□□□□ -1.72
BDF1P35817 CCM1YGR150C 2595 nt4.3□□□□□ -1.72
BDF1P35817 YLL054CYLL054C 2532 nt4.3□□□□□ -1.72
BDF1P35817 MCM7YBR202W 2538 nt4.3□□□□□ -1.72
BDF1P35817 NCR1YPL006W 3513 nt4.3□□□□□ -1.72
BDF1P35817 PHO81YGR233C 3537 nt4.29□□□□□ -1.72
BDF1P35817 ITC1YGL133W 3795 nt4.29□□□□□ -1.72
BDF1P35817 YIL002W-AYIL002W-A 210 nt4.29□□□□□ -1.72
BDF1P35817 snR50snR50 90 nt4.29□□□□□ -1.72
BDF1P35817 ATG2YNL242W 4779 nt4.29□□□□□ -1.72
BDF1P35817 CAT2YML042W 2013 nt4.28□□□□□ -1.72
BDF1P35817 YGR051CYGR051C 324 nt4.28□□□□□ -1.72
BDF1P35817 YHR073W-AYHR073W-A 177 nt4.28□□□□□ -1.72
BDF1P35817 YBR072C-AYBR072C-A 162 nt4.28□□□□□ -1.72
BDF1P35817 DIP2YLR129W 2832 nt4.28□□□□□ -1.72
BDF1P35817 ARO1YDR127W 4767 nt4.28□□□□□ -1.72
BDF1P35817 YKU80YMR106C 1890 nt4.28□□□□□ -1.72
BDF1P35817 STE23YLR389C 3084 nt4.27□□□□□ -1.73
BDF1P35817 SET2YJL168C 2202 nt4.27□□□□□ -1.73
BDF1P35817 SIN3YOL004W 4611 nt4.27□□□□□ -1.73
BDF1P35817 YCR102W-AYCR102W-A 198 nt4.27□□□□□ -1.73
BDF1P35817 PTP3YER075C 2787 nt4.27□□□□□ -1.73
BDF1P35817 VAC7YNL054W 3498 nt4.27□□□□□ -1.73
BDF1P35817 DIA2YOR080W 2199 nt4.26□□□□□ -1.73
BDF1P35817 YBL071C-BYBL071C-B 99 nt4.26□□□□□ -1.73
BDF1P35817 snR64snR64 101 nt4.25□□□□□ -1.73
BDF1P35817 PHM6YDR281C 315 nt4.25□□□□□ -1.73
BDF1P35817 YKL096C-BYKL096C-B 150 nt4.25□□□□□ -1.73
BDF1P35817 snR39BsnR39B 96 nt4.25□□□□□ -1.73
BDF1P35817 FUN30YAL019W 3396 nt4.25□□□□□ -1.73
BDF1P35817 CHO2YGR157W 2610 nt4.25□□□□□ -1.73
BDF1P35817 YTA7YGR270W 4140 nt4.24□□□□□ -1.73
BDF1P35817 TOP1YOL006C 2310 nt4.23□□□□□ -1.73
BDF1P35817 YDR210W-BYDR210W-B 5313 nt4.22□□□□□ -1.73
BDF1P35817 YDR261W-BYDR261W-B 5313 nt4.22□□□□□ -1.73
BDF1P35817 YFL002W-AYFL002W-A 5313 nt4.22□□□□□ -1.73
BDF1P35817 YGR161W-BYGR161W-B 5313 nt4.22□□□□□ -1.73
BDF1P35817 YLR410W-BYLR410W-B 5313 nt4.22□□□□□ -1.73
BDF1P35817 YCL019WYCL019W 5313 nt4.22□□□□□ -1.73
BDF1P35817 RPS26AYGL189C 360 nt4.22□□□□□ -1.73
BDF1P35817 TMA108YIL137C 2841 nt4.22□□□□□ -1.73
BDF1P35817 INP52YNL106C 3552 nt4.21□□□□□ -1.74
BDF1P35817 YGR240C-AYGR240C-A 201 nt4.21□□□□□ -1.74
BDF1P35817 UBP11YKR098C 2154 nt4.21□□□□□ -1.74
BDF1P35817 SCH9YHR205W 2475 nt4.21□□□□□ -1.74
BDF1P35817 STB6YKL072W 2301 nt4.21□□□□□ -1.74
BDF1P35817 SWI5YDR146C 2130 nt4.21□□□□□ -1.74
BDF1P35817 DBP10YDL031W 2988 nt4.2□□□□□ -1.74
BDF1P35817 NPR3YHL023C 3441 nt4.2□□□□□ -1.74
BDF1P35817 SWH1YAR042W 3567 nt4.19□□□□□ -1.74
BDF1P35817 TTI1YKL033W 3117 nt4.19□□□□□ -1.74
BDF1P35817 RAD34YDR314C 2079 nt4.18□□□□□ -1.74
BDF1P35817 VBA4YDR119W 2307 nt4.18□□□□□ -1.74
BDF1P35817 TFC1YBR123C 1950 nt4.18□□□□□ -1.74
BDF1P35817 BOI1YBL085W 2943 nt4.18□□□□□ -1.74
BDF1P35817 YCF1YDR135C 4548 nt4.17□□□□□ -1.74
BDF1P35817 MTC4YBR255W 2085 nt4.17□□□□□ -1.74
BDF1P35817 INP53YOR109W 3324 nt4.17□□□□□ -1.74
BDF1P35817 YLR035C-AYLR035C-A 3468 nt4.17□□□□□ -1.74
BDF1P35817 ULS1YOR191W 4860 nt4.17□□□□□ -1.74
BDF1P35817 POL3YDL102W 3294 nt4.17□□□□□ -1.74
BDF1P35817 NUP133YKR082W 3474 nt4.16□□□□□ -1.74
BDF1P35817 TIF4632YGL049C 2745 nt4.16□□□□□ -1.74
BDF1P35817 RRP6YOR001W 2202 nt4.15□□□□□ -1.74
BDF1P35817 YDR354C-AYDR354C-A 144 nt4.15□□□□□ -1.75
BDF1P35817 ACB1YGR037C 264 nt4.15□□□□□ -1.75
BDF1P35817 YLL020CYLL020C 306 nt4.15□□□□□ -1.75
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms