Protein–RNA interactions for Protein: P33241

LSP1, Lymphocyte-specific protein 1, humanhuman

Predictions only

Length 339 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P33241 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC20.27■□□□□ 0.84
LSP1P33241 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 AC055733.4-201ENST00000638462 1354 ntBASIC20.27■□□□□ 0.84
LSP1P33241 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
LSP1P33241 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
LSP1P33241 BX664725.1-201ENST00000438252 379 ntBASIC20.27■□□□□ 0.84
LSP1P33241 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
LSP1P33241 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.27■□□□□ 0.84
LSP1P33241 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LSP1P33241 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
LSP1P33241 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LSP1P33241 LTB4R2-202ENST00000528054 3092 ntBASIC20.27■□□□□ 0.84
LSP1P33241 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.27■□□□□ 0.84
LSP1P33241 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LSP1P33241 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LSP1P33241 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LSP1P33241 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
LSP1P33241 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LSP1P33241 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
LSP1P33241 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC20.26■□□□□ 0.83
LSP1P33241 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 MIR3181-201ENST00000578512 73 ntBASIC20.26■□□□□ 0.83
LSP1P33241 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
LSP1P33241 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
LSP1P33241 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC20.26■□□□□ 0.83
LSP1P33241 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LSP1P33241 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
LSP1P33241 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC20.25■□□□□ 0.83
LSP1P33241 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
LSP1P33241 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
LSP1P33241 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
LSP1P33241 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC20.25■□□□□ 0.83
LSP1P33241 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSP1P33241 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
LSP1P33241 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.24■□□□□ 0.83
LSP1P33241 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSP1P33241 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LSP1P33241 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LSP1P33241 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LSP1P33241 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.24■□□□□ 0.83
LSP1P33241 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LSP1P33241 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
LSP1P33241 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.24■□□□□ 0.83
LSP1P33241 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC20.24■□□□□ 0.83
LSP1P33241 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC20.24■□□□□ 0.83
LSP1P33241 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSP1P33241 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
LSP1P33241 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC20.24■□□□□ 0.83
LSP1P33241 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
LSP1P33241 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
LSP1P33241 LINC01465-201ENST00000408887 1940 ntBASIC20.23■□□□□ 0.83
LSP1P33241 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
LSP1P33241 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC20.23■□□□□ 0.83
LSP1P33241 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.23■□□□□ 0.83
LSP1P33241 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC20.23■□□□□ 0.83
LSP1P33241 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.23■□□□□ 0.83
LSP1P33241 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
LSP1P33241 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
LSP1P33241 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.22■□□□□ 0.83
LSP1P33241 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
LSP1P33241 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms