Protein–RNA interactions for Protein: P32246

CCR1, C-C chemokine receptor type 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCR1P32246 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.95■□□□□ 0.94
CCR1P32246 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCR1P32246 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCR1P32246 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.95■□□□□ 0.94
CCR1P32246 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.95■□□□□ 0.94
CCR1P32246 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCR1P32246 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCR1P32246 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCR1P32246 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCR1P32246 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
CCR1P32246 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 AC060766.5-201ENST00000590539 871 ntBASIC20.94■□□□□ 0.94
CCR1P32246 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.94■□□□□ 0.94
CCR1P32246 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.94■□□□□ 0.94
CCR1P32246 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.94■□□□□ 0.94
CCR1P32246 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.94■□□□□ 0.94
CCR1P32246 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
CCR1P32246 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCR1P32246 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCR1P32246 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC20.93■□□□□ 0.94
CCR1P32246 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCR1P32246 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCR1P32246 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.93■□□□□ 0.94
CCR1P32246 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCR1P32246 FEM1AP1-201ENST00000431297 1995 ntBASIC20.93■□□□□ 0.94
CCR1P32246 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.93■□□□□ 0.94
CCR1P32246 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.93■□□□□ 0.94
CCR1P32246 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
CCR1P32246 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCR1P32246 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
CCR1P32246 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCR1P32246 AC073314.1-201ENST00000568729 2216 ntBASIC20.93■□□□□ 0.94
CCR1P32246 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
CCR1P32246 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CCR1P32246 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
CCR1P32246 AC020907.5-201ENST00000624372 1936 ntBASIC20.92■□□□□ 0.94
CCR1P32246 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 SERP1-205ENST00000487153 657 ntTSL 4 BASIC20.92■□□□□ 0.94
CCR1P32246 RNA5SP413-201ENST00000516373 109 ntBASIC20.92■□□□□ 0.94
CCR1P32246 CD99P1-205ENST00000527459 561 ntBASIC20.92■□□□□ 0.94
CCR1P32246 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC20.92■□□□□ 0.94
CCR1P32246 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 AC092368.3-202ENST00000574180 1591 ntBASIC20.92■□□□□ 0.94
CCR1P32246 DPP3P2-201ENST00000416030 1696 ntBASIC20.92■□□□□ 0.94
CCR1P32246 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.92■□□□□ 0.94
CCR1P32246 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCR1P32246 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.91■□□□□ 0.94
CCR1P32246 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.91■□□□□ 0.94
CCR1P32246 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.91■□□□□ 0.94
CCR1P32246 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.91■□□□□ 0.94
CCR1P32246 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC20.91■□□□□ 0.94
CCR1P32246 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC20.91■□□□□ 0.94
CCR1P32246 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.91■□□□□ 0.94
CCR1P32246 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC20.91■□□□□ 0.94
CCR1P32246 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.91■□□□□ 0.94
CCR1P32246 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 AP005212.1-201ENST00000581547 1997 ntBASIC20.91■□□□□ 0.94
CCR1P32246 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC20.91■□□□□ 0.94
CCR1P32246 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCR1P32246 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CCR1P32246 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.9■□□□□ 0.94
CCR1P32246 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC20.9■□□□□ 0.94
CCR1P32246 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.9■□□□□ 0.94
CCR1P32246 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC20.9■□□□□ 0.94
CCR1P32246 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCR1P32246 AC023632.3-201ENST00000521633 145 ntBASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms