Protein–RNA interactions for Protein: P29320

EPHA3, Ephrin type-A receptor 3, humanhuman

Predictions only

Length 983 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA3P29320 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC19.65■□□□□ 0.74
EPHA3P29320 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
EPHA3P29320 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
EPHA3P29320 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
EPHA3P29320 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.65■□□□□ 0.74
EPHA3P29320 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EPHA3P29320 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC19.64■□□□□ 0.74
EPHA3P29320 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
EPHA3P29320 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
EPHA3P29320 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.64■□□□□ 0.73
EPHA3P29320 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC19.64■□□□□ 0.73
EPHA3P29320 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
EPHA3P29320 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.64■□□□□ 0.73
EPHA3P29320 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.64■□□□□ 0.73
EPHA3P29320 AL512625.3-202ENST00000591993 1091 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 AC120498.10-201ENST00000621827 505 ntBASIC19.64■□□□□ 0.73
EPHA3P29320 MIR6084-201ENST00000622012 110 ntBASIC19.64■□□□□ 0.73
EPHA3P29320 AC008406.3-201ENST00000620001 1374 ntBASIC19.64■□□□□ 0.73
EPHA3P29320 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
EPHA3P29320 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
EPHA3P29320 DPP3P2-201ENST00000416030 1696 ntBASIC19.64■□□□□ 0.73
EPHA3P29320 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
EPHA3P29320 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
EPHA3P29320 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
EPHA3P29320 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.63■□□□□ 0.73
EPHA3P29320 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.63■□□□□ 0.73
EPHA3P29320 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
EPHA3P29320 H19-201ENST00000411754 1788 ntTSL 5 BASIC19.63■□□□□ 0.73
EPHA3P29320 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.63■□□□□ 0.73
EPHA3P29320 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.63■□□□□ 0.73
EPHA3P29320 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.63■□□□□ 0.73
EPHA3P29320 AL031432.3-201ENST00000607698 485 ntBASIC19.63■□□□□ 0.73
EPHA3P29320 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
EPHA3P29320 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.63■□□□□ 0.73
EPHA3P29320 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA3P29320 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA3P29320 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA3P29320 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.62■□□□□ 0.73
EPHA3P29320 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA3P29320 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHA3P29320 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EPHA3P29320 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.62■□□□□ 0.73
EPHA3P29320 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.62■□□□□ 0.73
EPHA3P29320 SFTPC-205ENST00000521315 1046 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA3P29320 AC110285.6-201ENST00000617652 491 ntBASIC19.62■□□□□ 0.73
EPHA3P29320 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC19.62■□□□□ 0.73
EPHA3P29320 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA3P29320 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA3P29320 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC19.62■□□□□ 0.73
EPHA3P29320 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
EPHA3P29320 AP000974.1-201ENST00000623909 2387 ntBASIC19.62■□□□□ 0.73
EPHA3P29320 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
EPHA3P29320 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.62■□□□□ 0.73
EPHA3P29320 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
EPHA3P29320 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
EPHA3P29320 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.61■□□□□ 0.73
EPHA3P29320 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.61■□□□□ 0.73
EPHA3P29320 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC19.61■□□□□ 0.73
EPHA3P29320 AC010141.2-201ENST00000452426 721 ntBASIC19.61■□□□□ 0.73
EPHA3P29320 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 SLC7A5P2-201ENST00000553010 536 ntBASIC19.61■□□□□ 0.73
EPHA3P29320 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 BX323043.1-201ENST00000641006 1765 ntBASIC19.61■□□□□ 0.73
EPHA3P29320 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
EPHA3P29320 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
EPHA3P29320 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
EPHA3P29320 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms