Protein–RNA interactions for Protein: P25440

BRD2, Bromodomain-containing protein 2, humanhuman

Known RBP Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD2P25440 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC21.66■■□□□ 1.06
BRD2P25440 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.66■■□□□ 1.06
BRD2P25440 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
BRD2P25440 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.66■■□□□ 1.06
BRD2P25440 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC21.66■■□□□ 1.06
BRD2P25440 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 WT1-AS_3.1-201ENST00000613262 234 ntBASIC21.66■■□□□ 1.06
BRD2P25440 AL356652.1-201ENST00000615962 565 ntBASIC21.66■■□□□ 1.06
BRD2P25440 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC21.66■■□□□ 1.06
BRD2P25440 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC21.66■■□□□ 1.06
BRD2P25440 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
BRD2P25440 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
BRD2P25440 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC21.65■■□□□ 1.06
BRD2P25440 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC21.65■■□□□ 1.06
BRD2P25440 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD2P25440 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD2P25440 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD2P25440 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC21.65■■□□□ 1.06
BRD2P25440 AF201337.1-201ENST00000520239 748 ntBASIC21.65■■□□□ 1.06
BRD2P25440 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.65■■□□□ 1.06
BRD2P25440 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC21.65■■□□□ 1.06
BRD2P25440 CYP2T3P-201ENST00000601990 817 ntBASIC21.65■■□□□ 1.06
BRD2P25440 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
BRD2P25440 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD2P25440 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
BRD2P25440 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
BRD2P25440 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC21.65■■□□□ 1.06
BRD2P25440 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
BRD2P25440 AC020907.5-201ENST00000624372 1936 ntBASIC21.65■■□□□ 1.06
BRD2P25440 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.06
BRD2P25440 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BRD2P25440 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.64■■□□□ 1.06
BRD2P25440 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
BRD2P25440 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC21.64■■□□□ 1.06
BRD2P25440 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
BRD2P25440 AC026471.1-201ENST00000564629 3026 ntBASIC21.64■■□□□ 1.06
BRD2P25440 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC21.64■■□□□ 1.05
BRD2P25440 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRD2P25440 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD2P25440 AL512625.2-201ENST00000417533 625 ntBASIC21.64■■□□□ 1.05
BRD2P25440 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC21.64■■□□□ 1.05
BRD2P25440 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC21.64■■□□□ 1.05
BRD2P25440 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.64■■□□□ 1.05
BRD2P25440 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC21.64■■□□□ 1.05
BRD2P25440 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.64■■□□□ 1.05
BRD2P25440 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD2P25440 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD2P25440 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD2P25440 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC21.64■■□□□ 1.05
BRD2P25440 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
BRD2P25440 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
BRD2P25440 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 AC092720.2-201ENST00000602388 1665 ntBASIC21.63■■□□□ 1.05
BRD2P25440 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
BRD2P25440 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 GABARAPL3-202ENST00000624044 1851 ntBASIC21.63■■□□□ 1.05
BRD2P25440 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.63■■□□□ 1.05
BRD2P25440 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.63■■□□□ 1.05
BRD2P25440 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC21.63■■□□□ 1.05
BRD2P25440 GXYLT1P5-201ENST00000614548 1189 ntBASIC21.63■■□□□ 1.05
BRD2P25440 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.63■■□□□ 1.05
BRD2P25440 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC21.63■■□□□ 1.05
BRD2P25440 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.63■■□□□ 1.05
BRD2P25440 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
BRD2P25440 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.62■■□□□ 1.05
BRD2P25440 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD2P25440 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD2P25440 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD2P25440 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BRD2P25440 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
BRD2P25440 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC21.62■■□□□ 1.05
BRD2P25440 KRT17P1-201ENST00000399211 1546 ntBASIC21.62■■□□□ 1.05
BRD2P25440 MKRN4P-201ENST00000444706 1521 ntBASIC21.62■■□□□ 1.05
BRD2P25440 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
BRD2P25440 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21.62■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms