Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.09■□□□□ 0.33
COL8A2P25067 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.09■□□□□ 0.33
COL8A2P25067 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
COL8A2P25067 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.09■□□□□ 0.33
COL8A2P25067 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC17.09■□□□□ 0.33
COL8A2P25067 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
COL8A2P25067 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.09■□□□□ 0.33
COL8A2P25067 PLK5-205ENST00000642079 1969 ntBASIC17.09■□□□□ 0.33
COL8A2P25067 PALM-208ENST00000592155 2272 ntTSL 4 BASIC17.09■□□□□ 0.33
COL8A2P25067 AC073130.3-201ENST00000624389 2278 ntBASIC17.09■□□□□ 0.33
COL8A2P25067 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
COL8A2P25067 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
COL8A2P25067 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
COL8A2P25067 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
COL8A2P25067 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL8A2P25067 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC17.08■□□□□ 0.33
COL8A2P25067 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL8A2P25067 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL8A2P25067 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC17.08■□□□□ 0.33
COL8A2P25067 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL8A2P25067 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
COL8A2P25067 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL8A2P25067 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL8A2P25067 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC17.08■□□□□ 0.32
COL8A2P25067 KRT8P36-201ENST00000489121 1440 ntBASIC17.08■□□□□ 0.32
COL8A2P25067 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL8A2P25067 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC17.08■□□□□ 0.32
COL8A2P25067 KRT17P3-201ENST00000420566 1262 ntBASIC17.08■□□□□ 0.32
COL8A2P25067 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC17.08■□□□□ 0.32
COL8A2P25067 AL158047.1-201ENST00000445918 881 ntBASIC17.08■□□□□ 0.32
COL8A2P25067 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.08■□□□□ 0.32
COL8A2P25067 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC17.08■□□□□ 0.32
COL8A2P25067 AC006557.6-201ENST00000623071 864 ntBASIC17.08■□□□□ 0.32
COL8A2P25067 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL8A2P25067 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.08■□□□□ 0.32
COL8A2P25067 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
COL8A2P25067 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
COL8A2P25067 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
COL8A2P25067 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.07■□□□□ 0.32
COL8A2P25067 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 GCSHP5-201ENST00000443090 522 ntBASIC17.07■□□□□ 0.32
COL8A2P25067 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.07■□□□□ 0.32
COL8A2P25067 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
COL8A2P25067 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
COL8A2P25067 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
COL8A2P25067 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.06■□□□□ 0.32
COL8A2P25067 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
COL8A2P25067 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
COL8A2P25067 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.06■□□□□ 0.32
COL8A2P25067 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.06■□□□□ 0.32
COL8A2P25067 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 GGT1-206ENST00000404223 952 ntTSL 2 BASIC17.06■□□□□ 0.32
COL8A2P25067 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
COL8A2P25067 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC17.06■□□□□ 0.32
COL8A2P25067 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.06■□□□□ 0.32
COL8A2P25067 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
COL8A2P25067 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC17.06■□□□□ 0.32
COL8A2P25067 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC17.06■□□□□ 0.32
COL8A2P25067 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC17.06■□□□□ 0.32
COL8A2P25067 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.06■□□□□ 0.32
COL8A2P25067 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
COL8A2P25067 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.06■□□□□ 0.32
COL8A2P25067 MED17-221ENST00000639724 2317 ntTSL 5 BASIC17.05■□□□□ 0.32
COL8A2P25067 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms