Protein–RNA interactions for Protein: P24385

CCND1, G1/S-specific cyclin-D1, humanhuman

Predictions only

Length 295 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1P24385 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC20.3■□□□□ 0.84
CCND1P24385 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CCND1P24385 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 AP000974.1-201ENST00000623909 2387 ntBASIC20.29■□□□□ 0.84
CCND1P24385 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
CCND1P24385 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC20.29■□□□□ 0.84
CCND1P24385 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CCND1P24385 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.29■□□□□ 0.84
CCND1P24385 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CCND1P24385 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC20.29■□□□□ 0.84
CCND1P24385 AP001160.3-201ENST00000601484 763 ntBASIC20.29■□□□□ 0.84
CCND1P24385 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC20.29■□□□□ 0.84
CCND1P24385 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.29■□□□□ 0.84
CCND1P24385 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CCND1P24385 AC004408.2-201ENST00000623613 2777 ntBASIC20.29■□□□□ 0.84
CCND1P24385 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.28■□□□□ 0.84
CCND1P24385 KRT16P2-201ENST00000414673 1423 ntBASIC20.28■□□□□ 0.84
CCND1P24385 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCND1P24385 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCND1P24385 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.28■□□□□ 0.84
CCND1P24385 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCND1P24385 NTF6G-201ENST00000591094 616 ntBASIC20.28■□□□□ 0.84
CCND1P24385 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCND1P24385 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
CCND1P24385 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
CCND1P24385 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.28■□□□□ 0.84
CCND1P24385 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCND1P24385 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
CCND1P24385 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
CCND1P24385 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
CCND1P24385 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 AC112907.3-201ENST00000577781 2400 ntBASIC20.27■□□□□ 0.84
CCND1P24385 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC20.27■□□□□ 0.84
CCND1P24385 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.27■□□□□ 0.84
CCND1P24385 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
CCND1P24385 MIR5787-201ENST00000611784 55 ntBASIC20.27■□□□□ 0.84
CCND1P24385 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCND1P24385 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
CCND1P24385 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
CCND1P24385 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC20.27■□□□□ 0.84
CCND1P24385 USP39-204ENST00000409766 2033 ntTSL 2 BASIC20.27■□□□□ 0.84
CCND1P24385 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
CCND1P24385 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCND1P24385 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC20.27■□□□□ 0.83
CCND1P24385 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC20.26■□□□□ 0.83
CCND1P24385 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 AC061975.6-201ENST00000579045 1553 ntBASIC20.26■□□□□ 0.83
CCND1P24385 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC20.26■□□□□ 0.83
CCND1P24385 CCNE1-201ENST00000262643 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.26■□□□□ 0.83
CCND1P24385 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC20.26■□□□□ 0.83
CCND1P24385 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 AC027702.1-201ENST00000563810 1770 ntBASIC20.26■□□□□ 0.83
CCND1P24385 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCND1P24385 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC20.26■□□□□ 0.83
CCND1P24385 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC20.25■□□□□ 0.83
CCND1P24385 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC20.25■□□□□ 0.83
CCND1P24385 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC20.25■□□□□ 0.83
CCND1P24385 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.25■□□□□ 0.83
CCND1P24385 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
CCND1P24385 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.25■□□□□ 0.83
CCND1P24385 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCND1P24385 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33.9 ms