Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 MYB-221ENST00000527615 2381 ntTSL 5 BASIC24.68■■□□□ 1.54
ATP2B4P23634 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2B4P23634 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC24.68■■□□□ 1.54
ATP2B4P23634 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2B4P23634 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2B4P23634 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC24.68■■□□□ 1.54
ATP2B4P23634 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC24.68■■□□□ 1.54
ATP2B4P23634 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC24.67■■□□□ 1.54
ATP2B4P23634 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC24.67■■□□□ 1.54
ATP2B4P23634 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC24.67■■□□□ 1.54
ATP2B4P23634 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 AC121338.2-201ENST00000622535 1744 ntBASIC24.67■■□□□ 1.54
ATP2B4P23634 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC24.67■■□□□ 1.54
ATP2B4P23634 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC24.67■■□□□ 1.54
ATP2B4P23634 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC24.67■■□□□ 1.54
ATP2B4P23634 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC24.67■■□□□ 1.54
ATP2B4P23634 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 AL049796.1-201ENST00000565336 1766 ntBASIC24.67■■□□□ 1.54
ATP2B4P23634 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
ATP2B4P23634 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2B4P23634 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2B4P23634 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC24.66■■□□□ 1.54
ATP2B4P23634 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC24.66■■□□□ 1.54
ATP2B4P23634 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2B4P23634 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2B4P23634 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC24.66■■□□□ 1.54
ATP2B4P23634 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2B4P23634 F2R-202ENST00000505600 442 ntTSL 2 BASIC24.66■■□□□ 1.54
ATP2B4P23634 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC24.66■■□□□ 1.54
ATP2B4P23634 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC24.66■■□□□ 1.54
ATP2B4P23634 AF186192.3-201ENST00000583427 947 ntBASIC24.66■■□□□ 1.54
ATP2B4P23634 AL121906.2-201ENST00000621597 723 ntBASIC24.66■■□□□ 1.54
ATP2B4P23634 AC133561.5-201ENST00000635547 218 ntBASIC24.66■■□□□ 1.54
ATP2B4P23634 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2B4P23634 AL117328.2-201ENST00000624617 1940 ntBASIC24.66■■□□□ 1.54
ATP2B4P23634 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.66■■□□□ 1.54
ATP2B4P23634 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC24.66■■□□□ 1.54
ATP2B4P23634 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC24.66■■□□□ 1.54
ATP2B4P23634 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC24.65■■□□□ 1.54
ATP2B4P23634 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC24.65■■□□□ 1.54
ATP2B4P23634 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC24.65■■□□□ 1.54
ATP2B4P23634 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC24.65■■□□□ 1.54
ATP2B4P23634 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
ATP2B4P23634 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2B4P23634 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC24.65■■□□□ 1.54
ATP2B4P23634 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.65■■□□□ 1.54
ATP2B4P23634 AC026471.5-201ENST00000615068 467 ntBASIC24.65■■□□□ 1.54
ATP2B4P23634 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2B4P23634 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC24.65■■□□□ 1.54
ATP2B4P23634 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2B4P23634 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC24.65■■□□□ 1.54
ATP2B4P23634 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
ATP2B4P23634 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2B4P23634 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2B4P23634 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC24.64■■□□□ 1.54
ATP2B4P23634 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2B4P23634 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
ATP2B4P23634 TREX2-204ENST00000370212 861 ntTSL 5 BASIC24.64■■□□□ 1.54
ATP2B4P23634 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC24.64■■□□□ 1.54
ATP2B4P23634 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC24.64■■□□□ 1.54
ATP2B4P23634 AL353807.1-201ENST00000427475 662 ntBASIC24.64■■□□□ 1.54
ATP2B4P23634 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC24.64■■□□□ 1.54
ATP2B4P23634 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC24.64■■□□□ 1.54
ATP2B4P23634 PNN-205ENST00000556530 601 ntTSL 2 BASIC24.64■■□□□ 1.54
ATP2B4P23634 GRAP-204ENST00000573099 846 ntTSL 3 BASIC24.64■■□□□ 1.54
ATP2B4P23634 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC24.64■■□□□ 1.54
ATP2B4P23634 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC24.64■■□□□ 1.53
ATP2B4P23634 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC24.64■■□□□ 1.53
ATP2B4P23634 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC24.64■■□□□ 1.53
ATP2B4P23634 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC24.64■■□□□ 1.53
ATP2B4P23634 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2B4P23634 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2B4P23634 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2B4P23634 MIR1224-201ENST00000408193 85 ntBASIC24.63■■□□□ 1.53
ATP2B4P23634 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2B4P23634 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC24.63■■□□□ 1.53
ATP2B4P23634 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC24.63■■□□□ 1.53
ATP2B4P23634 RPS15-203ENST00000586096 570 ntTSL 2 BASIC24.63■■□□□ 1.53
ATP2B4P23634 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC24.63■■□□□ 1.53
ATP2B4P23634 FBXW4P1-201ENST00000426721 2239 ntBASIC24.63■■□□□ 1.53
ATP2B4P23634 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2B4P23634 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
ATP2B4P23634 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2B4P23634 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2B4P23634 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
ATP2B4P23634 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2B4P23634 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC24.62■■□□□ 1.53
ATP2B4P23634 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2B4P23634 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2B4P23634 AL024507.2-201ENST00000606070 2574 ntBASIC24.62■■□□□ 1.53
ATP2B4P23634 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
ATP2B4P23634 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC24.61■■□□□ 1.53
ATP2B4P23634 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC24.61■■□□□ 1.53
ATP2B4P23634 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC24.61■■□□□ 1.53
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms