Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC21.33■■□□□ 1
MMP8P22894 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
MMP8P22894 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.32■■□□□ 1
MMP8P22894 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC21.32■■□□□ 1
MMP8P22894 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP8P22894 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.32■■□□□ 1
MMP8P22894 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP8P22894 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC21.32■■□□□ 1
MMP8P22894 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
MMP8P22894 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP8P22894 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP8P22894 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.32■■□□□ 1
MMP8P22894 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
MMP8P22894 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC21.32■■□□□ 1
MMP8P22894 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC21.31■■□□□ 1
MMP8P22894 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC21.31■■□□□ 1
MMP8P22894 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.31■■□□□ 1
MMP8P22894 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC21.31■■□□□ 1
MMP8P22894 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.31■■□□□ 1
MMP8P22894 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC21.31■■□□□ 1
MMP8P22894 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC21.3■■□□□ 1
MMP8P22894 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC21.3■■□□□ 1
MMP8P22894 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 MIR663A-201ENST00000385250 93 ntBASIC21.3■■□□□ 1
MMP8P22894 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC21.3■■□□□ 1
MMP8P22894 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
MMP8P22894 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
MMP8P22894 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC21.3■■□□□ 1
MMP8P22894 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC21.3■■□□□ 1
MMP8P22894 KRT17P1-201ENST00000399211 1546 ntBASIC21.29■■□□□ 1
MMP8P22894 PTBP1P-201ENST00000554374 1601 ntBASIC21.29■■□□□ 1
MMP8P22894 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP8P22894 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP8P22894 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP8P22894 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
MMP8P22894 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC21.29■■□□□ 1
MMP8P22894 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC21.29■■□□□ 1
MMP8P22894 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
MMP8P22894 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
MMP8P22894 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP8P22894 AL589743.5-201ENST00000616611 1050 ntBASIC21.29■■□□□ 1
MMP8P22894 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.29■■□□□ 1
MMP8P22894 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.29■■□□□ 1
MMP8P22894 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
MMP8P22894 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC21.29■■□□□ 1
MMP8P22894 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC21.29■■□□□ 1
MMP8P22894 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC21.28■■□□□ 1
MMP8P22894 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
MMP8P22894 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
MMP8P22894 TCF3P1-201ENST00000423021 1937 ntBASIC21.28■■□□□ 1
MMP8P22894 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.28■■□□□ 1
MMP8P22894 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.28■■□□□ 1
MMP8P22894 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC21.28■■□□□ 1
MMP8P22894 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC21.28■■□□□ 1
MMP8P22894 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP8P22894 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP8P22894 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP8P22894 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.28■■□□□ 1
MMP8P22894 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
MMP8P22894 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC21.28■■□□□ 1
MMP8P22894 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC21.28■■□□□ 1
MMP8P22894 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
MMP8P22894 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
MMP8P22894 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC21.27■■□□□ 1
MMP8P22894 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
MMP8P22894 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
MMP8P22894 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC21.27■■□□□ 1
MMP8P22894 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.27■■□□□ 1
MMP8P22894 AF201337.1-201ENST00000520239 748 ntBASIC21.27■■□□□ 1
MMP8P22894 AC105036.2-201ENST00000569468 176 ntBASIC21.27■■□□□ 1
MMP8P22894 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC21.27■■□□□ 1
MMP8P22894 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.27■■□□□ 1
MMP8P22894 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC21.27■■□□□ 1
MMP8P22894 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.27■■□□□ 1
MMP8P22894 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC21.27■■□□□ 1
MMP8P22894 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
MMP8P22894 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
MMP8P22894 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC21.27■□□□□ 0.99
MMP8P22894 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms