Protein–RNA interactions for Protein: P20053

PRP4, U4/U6 small nuclear ribonucleoprotein PRP4, yeastyeast

Known RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP4P20053 HRD3YLR207W 2502 nt2.59□□□□□ -1.99
PRP4P20053 YPR002C-AYPR002C-A 198 nt2.59□□□□□ -1.99
PRP4P20053 YDR239CYDR239C 2364 nt2.59□□□□□ -2
PRP4P20053 SUL1YBR294W 2580 nt2.58□□□□□ -2
PRP4P20053 LCD1YDR499W 2244 nt2.58□□□□□ -2
PRP4P20053 FIR1YER032W 2631 nt2.58□□□□□ -2
PRP4P20053 SEF1YBL066C 3447 nt2.58□□□□□ -2
PRP4P20053 UPS1YLR193C 528 nt2.58□□□□□ -2
PRP4P20053 YOR055WYOR055W 435 nt2.58□□□□□ -2
PRP4P20053 YOR333CYOR333C 417 nt2.58□□□□□ -2
PRP4P20053 VPS16YPL045W 2397 nt2.57□□□□□ -2
PRP4P20053 ATP8Q0080 147 nt2.57□□□□□ -2
PRP4P20053 VPS55YJR044C 423 nt2.57□□□□□ -2
PRP4P20053 YLR012CYLR012C 300 nt2.57□□□□□ -2
PRP4P20053 GRR1YJR090C 3456 nt2.56□□□□□ -2
PRP4P20053 SMD1YGR074W 441 nt2.56□□□□□ -2
PRP4P20053 YLR146W-AYLR146W-A 189 nt2.56□□□□□ -2
PRP4P20053 YLR255CYLR255C 354 nt2.56□□□□□ -2
PRP4P20053 YLR342W-AYLR342W-A 174 nt2.56□□□□□ -2
PRP4P20053 PEP3YLR148W 2757 nt2.56□□□□□ -2
PRP4P20053 SPF1YEL031W 3648 nt2.56□□□□□ -2
PRP4P20053 VIK1YPL253C 1944 nt2.56□□□□□ -2
PRP4P20053 RRP6YOR001W 2202 nt2.56□□□□□ -2
PRP4P20053 SWI6YLR182W 2412 nt2.56□□□□□ -2
PRP4P20053 tC(GCA)BtC(GCA)B 72 nt2.55□□□□□ -2
PRP4P20053 tC(GCA)GtC(GCA)G 72 nt2.55□□□□□ -2
PRP4P20053 tC(GCA)P1tC(GCA)P1 72 nt2.55□□□□□ -2
PRP4P20053 tC(GCA)P2tC(GCA)P2 72 nt2.55□□□□□ -2
PRP4P20053 CRM1YGR218W 3255 nt2.55□□□□□ -2
PRP4P20053 NOP10YHR072W-A 177 nt2.55□□□□□ -2
PRP4P20053 SGM1YJR134C 2124 nt2.55□□□□□ -2
PRP4P20053 YLR149CYLR149C 2193 nt2.55□□□□□ -2
PRP4P20053 VPS34YLR240W 2628 nt2.55□□□□□ -2
PRP4P20053 YOR302WYOR302W 78 nt2.55□□□□□ -2
PRP4P20053 RPS12YOR369C 432 nt2.55□□□□□ -2
PRP4P20053 SVL3YPL032C 2478 nt2.55□□□□□ -2
PRP4P20053 ISW1YBR245C 3390 nt2.55□□□□□ -2
PRP4P20053 PSD2YGR170W 3417 nt2.55□□□□□ -2
PRP4P20053 AFI1YOR129C 2682 nt2.55□□□□□ -2
PRP4P20053 SDC25YLL016W 3147 nt2.54□□□□□ -2
PRP4P20053 MNL2YLR057W 2550 nt2.54□□□□□ -2
PRP4P20053 HYP2YEL034W 474 nt2.54□□□□□ -2
PRP4P20053 OLI1Q0130 231 nt2.54□□□□□ -2
PRP4P20053 RSE1YML049C 4086 nt2.54□□□□□ -2
PRP4P20053 DBP10YDL031W 2988 nt2.54□□□□□ -2
PRP4P20053 PDR1YGL013C 3207 nt2.53□□□□□ -2
PRP4P20053 YMR321CYMR321C 318 nt2.53□□□□□ -2
PRP4P20053 YOR170WYOR170W 306 nt2.53□□□□□ -2
PRP4P20053 ACM1YPL267W 630 nt2.53□□□□□ -2
PRP4P20053 TCB2YNL087W 3537 nt2.53□□□□□ -2
PRP4P20053 SIR3YLR442C 2937 nt2.53□□□□□ -2
PRP4P20053 SSN2YDR443C 4263 nt2.52□□□□□ -2.01
PRP4P20053 NUP120YKL057C 3114 nt2.52□□□□□ -2.01
PRP4P20053 YLR120W-AYLR120W-A 102 nt2.52□□□□□ -2.01
PRP4P20053 SCH9YHR205W 2475 nt2.52□□□□□ -2.01
PRP4P20053 PDE2YOR360C 1581 nt2.52□□□□□ -2.01
PRP4P20053 YBT1YLL048C 4986 nt2.52□□□□□ -2.01
PRP4P20053 CDC27YBL084C 2277 nt2.52□□□□□ -2.01
PRP4P20053 SMY2YBR172C 2223 nt2.52□□□□□ -2.01
PRP4P20053 MUK1YPL070W 1839 nt2.52□□□□□ -2.01
PRP4P20053 NOP53YPL146C 1368 nt2.51□□□□□ -2.01
PRP4P20053 SSQ1YLR369W 1974 nt2.51□□□□□ -2.01
PRP4P20053 SPT21YMR179W 2277 nt2.51□□□□□ -2.01
PRP4P20053 tF(GAA)QtF(GAA)Q 75 nt2.51□□□□□ -2.01
PRP4P20053 ACB1YGR037C 264 nt2.51□□□□□ -2.01
PRP4P20053 YBR277CYBR277C 402 nt2.51□□□□□ -2.01
PRP4P20053 STE11YLR362W 2154 nt2.51□□□□□ -2.01
PRP4P20053 YLL032CYLL032C 2478 nt2.51□□□□□ -2.01
PRP4P20053 INP53YOR109W 3324 nt2.51□□□□□ -2.01
PRP4P20053 TRS65YGR166W 1683 nt2.5□□□□□ -2.01
PRP4P20053 INP2YMR163C 2118 nt2.5□□□□□ -2.01
PRP4P20053 SSS1YDR086C 243 nt2.5□□□□□ -2.01
PRP4P20053 RRT15YLR162W-A 189 nt2.5□□□□□ -2.01
PRP4P20053 TOP2YNL088W 4287 nt2.5□□□□□ -2.01
PRP4P20053 SLY1YDR189W 2001 nt2.49□□□□□ -2.01
PRP4P20053 CSF1YLR087C 8877 nt2.49□□□□□ -2.01
PRP4P20053 PLC1YPL268W 2610 nt2.49□□□□□ -2.01
PRP4P20053 YRB1YDR002W 606 nt2.49□□□□□ -2.01
PRP4P20053 RPL42BYHR141C 321 nt2.49□□□□□ -2.01
PRP4P20053 RPL42AYNL162W 321 nt2.49□□□□□ -2.01
PRP4P20053 RPB10YOR210W 213 nt2.49□□□□□ -2.01
PRP4P20053 snR43snR43 209 nt2.49□□□□□ -2.01
PRP4P20053 YKU80YMR106C 1890 nt2.49□□□□□ -2.01
PRP4P20053 YDR286CYDR286C 345 nt2.48□□□□□ -2.01
PRP4P20053 SNC1YAL030W 354 nt2.48□□□□□ -2.01
PRP4P20053 HOS4YIL112W 3252 nt2.48□□□□□ -2.01
PRP4P20053 HSC82YMR186W 2118 nt2.48□□□□□ -2.01
PRP4P20053 GIS1YDR096W 2685 nt2.47□□□□□ -2.01
PRP4P20053 PXA2YKL188C 2562 nt2.47□□□□□ -2.01
PRP4P20053 YDL007C-AYDL007C-A 258 nt2.47□□□□□ -2.01
PRP4P20053 YER088C-AYER088C-A 324 nt2.47□□□□□ -2.01
PRP4P20053 YAL042C-AYAL042C-A 378 nt2.47□□□□□ -2.01
PRP4P20053 DNF1YER166W 4716 nt2.46□□□□□ -2.02
PRP4P20053 RGA2YDR379W 3030 nt2.46□□□□□ -2.02
PRP4P20053 YJL150WYJL150W 303 nt2.46□□□□□ -2.02
PRP4P20053 COA4YLR218C 453 nt2.46□□□□□ -2.02
PRP4P20053 YEL043WYEL043W 2871 nt2.45□□□□□ -2.02
PRP4P20053 EMC6YLL014W 327 nt2.45□□□□□ -2.02
PRP4P20053 COX14YML129C 213 nt2.45□□□□□ -2.02
PRP4P20053 YNL114CYNL114C 372 nt2.45□□□□□ -2.02
Retrieved 100 of 7,029 protein–RNA pairs in 76.1 ms