Protein–RNA interactions for Protein: P13942

COL11A2, Collagen alpha-2(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,736 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2P13942 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL11A2P13942 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC24.98■■□□□ 1.59
COL11A2P13942 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC24.98■■□□□ 1.59
COL11A2P13942 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC24.98■■□□□ 1.59
COL11A2P13942 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC24.98■■□□□ 1.59
COL11A2P13942 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC24.98■■□□□ 1.59
COL11A2P13942 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
COL11A2P13942 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL11A2P13942 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL11A2P13942 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL11A2P13942 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
COL11A2P13942 AP002982.1-201ENST00000492365 877 ntBASIC24.97■■□□□ 1.59
COL11A2P13942 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
COL11A2P13942 CFL2-205ENST00000555765 632 ntTSL 2 BASIC24.97■■□□□ 1.59
COL11A2P13942 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC24.97■■□□□ 1.59
COL11A2P13942 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC24.97■■□□□ 1.59
COL11A2P13942 KRT8P36-201ENST00000489121 1440 ntBASIC24.97■■□□□ 1.59
COL11A2P13942 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC24.97■■□□□ 1.59
COL11A2P13942 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL11A2P13942 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL11A2P13942 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC24.96■■□□□ 1.59
COL11A2P13942 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL11A2P13942 TPM1-226ENST00000560959 925 ntTSL 2 BASIC24.96■■□□□ 1.59
COL11A2P13942 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC24.96■■□□□ 1.59
COL11A2P13942 RMI2-205ENST00000576027 818 ntTSL 2 BASIC24.96■■□□□ 1.59
COL11A2P13942 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC24.96■■□□□ 1.59
COL11A2P13942 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
COL11A2P13942 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC24.95■■□□□ 1.59
COL11A2P13942 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.59
COL11A2P13942 FITM1-202ENST00000559294 800 ntBASIC24.95■■□□□ 1.59
COL11A2P13942 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC24.95■■□□□ 1.59
COL11A2P13942 AC006011.2-201ENST00000621313 1158 ntBASIC24.95■■□□□ 1.59
COL11A2P13942 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.95■■□□□ 1.59
COL11A2P13942 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL11A2P13942 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL11A2P13942 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC24.95■■□□□ 1.58
COL11A2P13942 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL11A2P13942 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL11A2P13942 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL11A2P13942 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
COL11A2P13942 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC24.95■■□□□ 1.58
COL11A2P13942 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
COL11A2P13942 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC24.95■■□□□ 1.58
COL11A2P13942 AC242852.2-201ENST00000615738 1807 ntBASIC24.95■■□□□ 1.58
COL11A2P13942 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
COL11A2P13942 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC24.95■■□□□ 1.58
COL11A2P13942 NTF6B-201ENST00000591913 560 ntBASIC24.95■■□□□ 1.58
COL11A2P13942 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC24.95■■□□□ 1.58
COL11A2P13942 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC24.94■■□□□ 1.58
COL11A2P13942 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
COL11A2P13942 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC24.94■■□□□ 1.58
COL11A2P13942 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC24.94■■□□□ 1.58
COL11A2P13942 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC24.94■■□□□ 1.58
COL11A2P13942 NAPSB-206ENST00000562112 1266 ntBASIC24.94■■□□□ 1.58
COL11A2P13942 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC24.94■■□□□ 1.58
COL11A2P13942 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL11A2P13942 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL11A2P13942 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC24.94■■□□□ 1.58
COL11A2P13942 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC24.94■■□□□ 1.58
COL11A2P13942 ABHD6-201ENST00000295962 2393 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL11A2P13942 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL11A2P13942 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL11A2P13942 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC24.93■■□□□ 1.58
COL11A2P13942 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC24.93■■□□□ 1.58
COL11A2P13942 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC24.93■■□□□ 1.58
COL11A2P13942 C1QL1P1-201ENST00000568105 661 ntBASIC24.93■■□□□ 1.58
COL11A2P13942 WWOX-216ENST00000569818 525 ntBASIC24.93■■□□□ 1.58
COL11A2P13942 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC24.93■■□□□ 1.58
COL11A2P13942 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC24.93■■□□□ 1.58
COL11A2P13942 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL11A2P13942 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL11A2P13942 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC24.93■■□□□ 1.58
COL11A2P13942 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC24.92■■□□□ 1.58
COL11A2P13942 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC24.92■■□□□ 1.58
COL11A2P13942 AL590326.2-201ENST00000625139 305 ntBASIC24.92■■□□□ 1.58
COL11A2P13942 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC24.92■■□□□ 1.58
COL11A2P13942 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC24.92■■□□□ 1.58
COL11A2P13942 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC24.92■■□□□ 1.58
COL11A2P13942 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC24.92■■□□□ 1.58
COL11A2P13942 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC24.92■■□□□ 1.58
COL11A2P13942 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC24.92■■□□□ 1.58
COL11A2P13942 AC004264.1-201ENST00000608354 794 ntBASIC24.92■■□□□ 1.58
COL11A2P13942 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC24.92■■□□□ 1.58
COL11A2P13942 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL11A2P13942 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
COL11A2P13942 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC24.91■■□□□ 1.58
COL11A2P13942 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL11A2P13942 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
COL11A2P13942 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC24.91■■□□□ 1.58
COL11A2P13942 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC24.91■■□□□ 1.58
COL11A2P13942 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.91■■□□□ 1.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms