Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC022517.1-201ENST00000592429 346 ntBASIC19.64■□□□□ 0.73
PCNAP12004 BID-214ENST00000617586 542 ntTSL 5 BASIC19.64■□□□□ 0.73
PCNAP12004 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
PCNAP12004 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19.64■□□□□ 0.73
PCNAP12004 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC19.64■□□□□ 0.73
PCNAP12004 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.64■□□□□ 0.73
PCNAP12004 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNAP12004 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCNAP12004 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNAP12004 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.64■□□□□ 0.73
PCNAP12004 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCNAP12004 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
PCNAP12004 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCNAP12004 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCNAP12004 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNAP12004 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.63■□□□□ 0.73
PCNAP12004 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCNAP12004 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNAP12004 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.63■□□□□ 0.73
PCNAP12004 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.63■□□□□ 0.73
PCNAP12004 AC092720.2-201ENST00000602388 1665 ntBASIC19.63■□□□□ 0.73
PCNAP12004 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNAP12004 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNAP12004 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.63■□□□□ 0.73
PCNAP12004 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.63■□□□□ 0.73
PCNAP12004 FAM21FP-204ENST00000608637 956 ntBASIC19.63■□□□□ 0.73
PCNAP12004 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.63■□□□□ 0.73
PCNAP12004 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCNAP12004 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNAP12004 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
PCNAP12004 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.63■□□□□ 0.73
PCNAP12004 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCNAP12004 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.63■□□□□ 0.73
PCNAP12004 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCNAP12004 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC19.63■□□□□ 0.73
PCNAP12004 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNAP12004 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.62■□□□□ 0.73
PCNAP12004 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
PCNAP12004 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNAP12004 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.62■□□□□ 0.73
PCNAP12004 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNAP12004 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCNAP12004 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC19.62■□□□□ 0.73
PCNAP12004 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNAP12004 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.62■□□□□ 0.73
PCNAP12004 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.62■□□□□ 0.73
PCNAP12004 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.62■□□□□ 0.73
PCNAP12004 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.62■□□□□ 0.73
PCNAP12004 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
PCNAP12004 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCNAP12004 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.62■□□□□ 0.73
PCNAP12004 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.62■□□□□ 0.73
PCNAP12004 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC19.62■□□□□ 0.73
PCNAP12004 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.62■□□□□ 0.73
PCNAP12004 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
PCNAP12004 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCNAP12004 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC19.61■□□□□ 0.73
PCNAP12004 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC19.61■□□□□ 0.73
PCNAP12004 PARL-206ENST00000435888 1098 ntTSL 5 BASIC19.61■□□□□ 0.73
PCNAP12004 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.61■□□□□ 0.73
PCNAP12004 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.61■□□□□ 0.73
PCNAP12004 AC007322.4-201ENST00000509611 723 ntBASIC19.61■□□□□ 0.73
PCNAP12004 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.61■□□□□ 0.73
PCNAP12004 DUX4L16-201ENST00000555130 1264 ntBASIC19.61■□□□□ 0.73
PCNAP12004 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC19.61■□□□□ 0.73
PCNAP12004 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.61■□□□□ 0.73
PCNAP12004 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.61■□□□□ 0.73
PCNAP12004 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.61■□□□□ 0.73
PCNAP12004 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCNAP12004 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.6■□□□□ 0.73
PCNAP12004 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC19.6■□□□□ 0.73
PCNAP12004 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCNAP12004 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC19.6■□□□□ 0.73
PCNAP12004 AC016405.3-201ENST00000607710 860 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms