Protein–RNA interactions for Protein: P0DMR1

HNRNPCL4, Heterogeneous nuclear ribonucleoprotein C-like 4, humanhuman

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPCL4P0DMR1 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
HNRNPCL4P0DMR1 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
HNRNPCL4P0DMR1 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 AC087633.2-202ENST00000565166 1439 ntBASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 AC007322.4-201ENST00000509611 723 ntBASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 AL356652.1-201ENST00000615962 565 ntBASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 AFG3L1P-217ENST00000557444 2447 ntBASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
HNRNPCL4P0DMR1 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 AC013268.1-206ENST00000638368 961 ntBASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 AC112229.1-201ENST00000639295 961 ntBASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
HNRNPCL4P0DMR1 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
HNRNPCL4P0DMR1 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC18.73■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms