Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC22.14■■□□□ 1.13
CHRNA1P02708 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC22.13■■□□□ 1.13
CHRNA1P02708 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
CHRNA1P02708 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.13■■□□□ 1.13
CHRNA1P02708 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHRNA1P02708 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC22.13■■□□□ 1.13
CHRNA1P02708 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC22.13■■□□□ 1.13
CHRNA1P02708 DHDH-203ENST00000522614 776 ntTSL 5 BASIC22.13■■□□□ 1.13
CHRNA1P02708 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC22.13■■□□□ 1.13
CHRNA1P02708 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC22.13■■□□□ 1.13
CHRNA1P02708 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
CHRNA1P02708 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHRNA1P02708 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC22.13■■□□□ 1.13
CHRNA1P02708 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHRNA1P02708 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
CHRNA1P02708 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
CHRNA1P02708 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CHRNA1P02708 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC22.12■■□□□ 1.13
CHRNA1P02708 AC121338.2-201ENST00000622535 1744 ntBASIC22.12■■□□□ 1.13
CHRNA1P02708 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC22.12■■□□□ 1.13
CHRNA1P02708 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
CHRNA1P02708 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC22.12■■□□□ 1.13
CHRNA1P02708 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC22.12■■□□□ 1.13
CHRNA1P02708 MIR4785-201ENST00000585005 73 ntBASIC22.12■■□□□ 1.13
CHRNA1P02708 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
CHRNA1P02708 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 ENPP7-201ENST00000328313 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC22.12■■□□□ 1.13
CHRNA1P02708 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC22.12■■□□□ 1.13
CHRNA1P02708 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC22.12■■□□□ 1.13
CHRNA1P02708 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.12■■□□□ 1.13
CHRNA1P02708 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CHRNA1P02708 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC22.11■■□□□ 1.13
CHRNA1P02708 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CHRNA1P02708 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.11■■□□□ 1.13
CHRNA1P02708 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHRNA1P02708 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CHRNA1P02708 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC22.11■■□□□ 1.13
CHRNA1P02708 PENK-204ENST00000518770 863 ntTSL 2 BASIC22.11■■□□□ 1.13
CHRNA1P02708 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.11■■□□□ 1.13
CHRNA1P02708 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.11■■□□□ 1.13
CHRNA1P02708 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC22.11■■□□□ 1.13
CHRNA1P02708 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC22.11■■□□□ 1.13
CHRNA1P02708 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC22.11■■□□□ 1.13
CHRNA1P02708 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC22.11■■□□□ 1.13
CHRNA1P02708 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC22.11■■□□□ 1.13
CHRNA1P02708 LINC01023-201ENST00000606054 436 ntBASIC22.11■■□□□ 1.13
CHRNA1P02708 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC22.11■■□□□ 1.13
CHRNA1P02708 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC22.11■■□□□ 1.13
CHRNA1P02708 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHRNA1P02708 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CHRNA1P02708 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC22.11■■□□□ 1.13
CHRNA1P02708 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHRNA1P02708 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHRNA1P02708 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CHRNA1P02708 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC22.11■■□□□ 1.13
CHRNA1P02708 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC22.1■■□□□ 1.13
CHRNA1P02708 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC22.1■■□□□ 1.13
CHRNA1P02708 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHRNA1P02708 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHRNA1P02708 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CHRNA1P02708 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHRNA1P02708 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.1■■□□□ 1.13
CHRNA1P02708 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC22.1■■□□□ 1.13
CHRNA1P02708 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHRNA1P02708 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC22.1■■□□□ 1.13
CHRNA1P02708 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC22.1■■□□□ 1.13
CHRNA1P02708 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC22.1■■□□□ 1.13
CHRNA1P02708 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC22.1■■□□□ 1.13
CHRNA1P02708 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.1■■□□□ 1.13
CHRNA1P02708 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CHRNA1P02708 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CHRNA1P02708 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
CHRNA1P02708 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC22.09■■□□□ 1.13
CHRNA1P02708 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 AL355075.4-201ENST00000554988 638 ntBASIC22.09■■□□□ 1.13
CHRNA1P02708 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC22.09■■□□□ 1.13
CHRNA1P02708 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CHRNA1P02708 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CHRNA1P02708 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms