Protein–RNA interactions for Protein: O96008

TOMM40, Mitochondrial import receptor subunit TOM40 homolog, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOMM40O96008 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOMM40O96008 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
TOMM40O96008 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TOMM40O96008 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
TOMM40O96008 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC15.8■□□□□ 0.12
TOMM40O96008 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TOMM40O96008 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.8■□□□□ 0.12
TOMM40O96008 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC15.8■□□□□ 0.12
TOMM40O96008 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC15.79■□□□□ 0.12
TOMM40O96008 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TOMM40O96008 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.79■□□□□ 0.12
TOMM40O96008 RBM17P2-201ENST00000616397 1405 ntBASIC15.79■□□□□ 0.12
TOMM40O96008 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC15.79■□□□□ 0.12
TOMM40O96008 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC15.79■□□□□ 0.12
TOMM40O96008 AC091799.1-201ENST00000422823 811 ntBASIC15.79■□□□□ 0.12
TOMM40O96008 AC007322.3-201ENST00000426526 701 ntBASIC15.79■□□□□ 0.12
TOMM40O96008 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC15.79■□□□□ 0.12
TOMM40O96008 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC15.79■□□□□ 0.12
TOMM40O96008 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
TOMM40O96008 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.79■□□□□ 0.12
TOMM40O96008 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC15.79■□□□□ 0.12
TOMM40O96008 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TOMM40O96008 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC15.79■□□□□ 0.12
TOMM40O96008 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TOMM40O96008 PCDHAC2-203ENST00000615316 3011 ntBASIC15.78■□□□□ 0.12
TOMM40O96008 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
TOMM40O96008 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 AC004854.2-201ENST00000608450 1441 ntBASIC15.78■□□□□ 0.12
TOMM40O96008 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC15.78■□□□□ 0.12
TOMM40O96008 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC15.78■□□□□ 0.12
TOMM40O96008 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC15.78■□□□□ 0.12
TOMM40O96008 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC15.78■□□□□ 0.12
TOMM40O96008 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC15.78■□□□□ 0.12
TOMM40O96008 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC15.78■□□□□ 0.12
TOMM40O96008 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC15.78■□□□□ 0.12
TOMM40O96008 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
TOMM40O96008 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.77■□□□□ 0.12
TOMM40O96008 AC087289.5-201ENST00000586076 3175 ntBASIC15.77■□□□□ 0.12
TOMM40O96008 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TOMM40O96008 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
TOMM40O96008 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TOMM40O96008 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
TOMM40O96008 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15.77■□□□□ 0.12
TOMM40O96008 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC15.77■□□□□ 0.12
TOMM40O96008 CD44-222ENST00000526025 1052 ntTSL 2 BASIC15.77■□□□□ 0.12
TOMM40O96008 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC15.77■□□□□ 0.12
TOMM40O96008 FAM21FP-204ENST00000608637 956 ntBASIC15.77■□□□□ 0.12
TOMM40O96008 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
TOMM40O96008 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
TOMM40O96008 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TOMM40O96008 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC15.77■□□□□ 0.11
TOMM40O96008 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
TOMM40O96008 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC15.77■□□□□ 0.11
TOMM40O96008 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC15.77■□□□□ 0.11
TOMM40O96008 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
TOMM40O96008 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
TOMM40O96008 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
TOMM40O96008 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC15.76■□□□□ 0.11
TOMM40O96008 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms