Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC31.8■■■□□ 2.68
PCF11O94913 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCF11O94913 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
PCF11O94913 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
PCF11O94913 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC31.79■■■□□ 2.68
PCF11O94913 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC31.79■■■□□ 2.68
PCF11O94913 AL049637.2-201ENST00000641778 930 ntBASIC31.79■■■□□ 2.68
PCF11O94913 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
PCF11O94913 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC31.78■■■□□ 2.68
PCF11O94913 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC31.78■■■□□ 2.68
PCF11O94913 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
PCF11O94913 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC31.78■■■□□ 2.68
PCF11O94913 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC31.77■■■□□ 2.68
PCF11O94913 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC31.77■■■□□ 2.68
PCF11O94913 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC31.77■■■□□ 2.68
PCF11O94913 TK2-204ENST00000525974 1178 ntTSL 2 BASIC31.77■■■□□ 2.68
PCF11O94913 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC31.77■■■□□ 2.68
PCF11O94913 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 AL121906.2-201ENST00000621597 723 ntBASIC31.77■■■□□ 2.68
PCF11O94913 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
PCF11O94913 AC110285.5-201ENST00000611501 352 ntBASIC31.77■■■□□ 2.68
PCF11O94913 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC31.76■■■□□ 2.68
PCF11O94913 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC31.76■■■□□ 2.68
PCF11O94913 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCF11O94913 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC31.76■■■□□ 2.67
PCF11O94913 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
PCF11O94913 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC31.76■■■□□ 2.67
PCF11O94913 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC31.76■■■□□ 2.67
PCF11O94913 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC31.76■■■□□ 2.67
PCF11O94913 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC31.76■■■□□ 2.67
PCF11O94913 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCF11O94913 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
PCF11O94913 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PCF11O94913 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC31.75■■■□□ 2.67
PCF11O94913 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC31.75■■■□□ 2.67
PCF11O94913 KRT18P35-201ENST00000510488 1269 ntBASIC31.75■■■□□ 2.67
PCF11O94913 PPOX-219ENST00000544598 813 ntTSL 2 BASIC31.75■■■□□ 2.67
PCF11O94913 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PCF11O94913 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
PCF11O94913 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
PCF11O94913 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
PCF11O94913 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PCF11O94913 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PCF11O94913 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PCF11O94913 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCF11O94913 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCF11O94913 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
PCF11O94913 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC31.74■■■□□ 2.67
PCF11O94913 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PCF11O94913 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC31.74■■■□□ 2.67
PCF11O94913 RARRES2P10-201ENST00000564312 460 ntBASIC31.74■■■□□ 2.67
PCF11O94913 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC31.74■■■□□ 2.67
PCF11O94913 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC31.74■■■□□ 2.67
PCF11O94913 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC31.74■■■□□ 2.67
PCF11O94913 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC31.74■■■□□ 2.67
PCF11O94913 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC31.73■■■□□ 2.67
PCF11O94913 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 AL355075.4-201ENST00000554988 638 ntBASIC31.73■■■□□ 2.67
PCF11O94913 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC31.73■■■□□ 2.67
PCF11O94913 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC31.73■■■□□ 2.67
PCF11O94913 GRAP-204ENST00000573099 846 ntTSL 3 BASIC31.73■■■□□ 2.67
PCF11O94913 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 STK25-234ENST00000535007 2459 ntTSL 2 BASIC31.73■■■□□ 2.67
PCF11O94913 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC31.73■■■□□ 2.67
PCF11O94913 AF106564.1-201ENST00000607058 2553 ntBASIC31.73■■■□□ 2.67
PCF11O94913 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
PCF11O94913 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
PCF11O94913 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
PCF11O94913 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PCF11O94913 AL121603.2-201ENST00000557373 2117 ntBASIC31.72■■■□□ 2.67
PCF11O94913 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC31.72■■■□□ 2.67
PCF11O94913 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC31.72■■■□□ 2.67
PCF11O94913 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC31.72■■■□□ 2.67
PCF11O94913 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC31.72■■■□□ 2.67
PCF11O94913 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PCF11O94913 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC31.72■■■□□ 2.67
PCF11O94913 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC31.72■■■□□ 2.67
PCF11O94913 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PCF11O94913 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC31.72■■■□□ 2.67
PCF11O94913 PENK-204ENST00000518770 863 ntTSL 2 BASIC31.72■■■□□ 2.67
PCF11O94913 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC31.72■■■□□ 2.67
PCF11O94913 AL121829.2-201ENST00000620908 328 ntBASIC31.72■■■□□ 2.67
PCF11O94913 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PCF11O94913 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
PCF11O94913 MCMBP-202ENST00000369077 2465 ntAPPRIS ALT1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PCF11O94913 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC31.71■■■□□ 2.67
PCF11O94913 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC31.71■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms