Protein–RNA interactions for Protein: O76031

CLPX, ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial, humanhuman

Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPXO76031 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.3■□□□□ 0.52
CLPXO76031 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 AC092171.4-201ENST00000609130 632 ntBASIC18.3■□□□□ 0.52
CLPXO76031 AC106739.1-201ENST00000617035 715 ntBASIC18.3■□□□□ 0.52
CLPXO76031 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
CLPXO76031 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.3■□□□□ 0.52
CLPXO76031 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC18.3■□□□□ 0.52
CLPXO76031 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLPXO76031 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
CLPXO76031 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CLPXO76031 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
CLPXO76031 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
CLPXO76031 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.29■□□□□ 0.52
CLPXO76031 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CLPXO76031 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLPXO76031 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC18.28■□□□□ 0.52
CLPXO76031 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
CLPXO76031 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPXO76031 EBPL-204ENST00000378272 766 ntTSL 3 BASIC18.28■□□□□ 0.52
CLPXO76031 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC18.28■□□□□ 0.52
CLPXO76031 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.28■□□□□ 0.52
CLPXO76031 AL031602.1-201ENST00000633169 911 ntBASIC18.28■□□□□ 0.52
CLPXO76031 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC18.28■□□□□ 0.52
CLPXO76031 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
CLPXO76031 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CLPXO76031 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CLPXO76031 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLPXO76031 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC18.27■□□□□ 0.52
CLPXO76031 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPXO76031 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPXO76031 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CLPXO76031 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC18.27■□□□□ 0.52
CLPXO76031 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPXO76031 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPXO76031 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CLPXO76031 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
CLPXO76031 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.52
CLPXO76031 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.27■□□□□ 0.52
CLPXO76031 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CLPXO76031 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLPXO76031 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CLPXO76031 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC18.26■□□□□ 0.51
CLPXO76031 AL138781.2-201ENST00000617896 1843 ntBASIC18.26■□□□□ 0.51
CLPXO76031 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.26■□□□□ 0.51
CLPXO76031 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPXO76031 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPXO76031 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.26■□□□□ 0.51
CLPXO76031 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLPXO76031 PBX2P1-201ENST00000493219 1291 ntBASIC18.26■□□□□ 0.51
CLPXO76031 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 AC099791.2-201ENST00000605725 427 ntBASIC18.26■□□□□ 0.51
CLPXO76031 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.26■□□□□ 0.51
CLPXO76031 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPXO76031 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CLPXO76031 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CLPXO76031 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.26■□□□□ 0.51
CLPXO76031 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CLPXO76031 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
CLPXO76031 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
CLPXO76031 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms