Protein–RNA interactions for Protein: O60637

TSPAN3, Tetraspanin-3, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3O60637 MOK-233ENST00000524214 1539 ntTSL 2 BASIC20.85■□□□□ 0.93
TSPAN3O60637 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
TSPAN3O60637 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.85■□□□□ 0.93
TSPAN3O60637 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN3O60637 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN3O60637 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN3O60637 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.85■□□□□ 0.93
TSPAN3O60637 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN3O60637 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN3O60637 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC20.85■□□□□ 0.93
TSPAN3O60637 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
TSPAN3O60637 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.85■□□□□ 0.93
TSPAN3O60637 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC20.84■□□□□ 0.93
TSPAN3O60637 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.84■□□□□ 0.93
TSPAN3O60637 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.84■□□□□ 0.93
TSPAN3O60637 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.84■□□□□ 0.93
TSPAN3O60637 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC20.84■□□□□ 0.93
TSPAN3O60637 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 SAMD10-201ENST00000369886 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
TSPAN3O60637 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
TSPAN3O60637 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN3O60637 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN3O60637 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN3O60637 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN3O60637 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.83■□□□□ 0.93
TSPAN3O60637 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN3O60637 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.83■□□□□ 0.93
TSPAN3O60637 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN3O60637 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
TSPAN3O60637 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.83■□□□□ 0.93
TSPAN3O60637 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
TSPAN3O60637 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.83■□□□□ 0.93
TSPAN3O60637 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.83■□□□□ 0.93
TSPAN3O60637 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.83■□□□□ 0.93
TSPAN3O60637 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TSPAN3O60637 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
TSPAN3O60637 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.83■□□□□ 0.92
TSPAN3O60637 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC20.82■□□□□ 0.92
TSPAN3O60637 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC20.82■□□□□ 0.92
TSPAN3O60637 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
TSPAN3O60637 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC20.82■□□□□ 0.92
TSPAN3O60637 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.82■□□□□ 0.92
TSPAN3O60637 AC098590.1-201ENST00000468126 897 ntBASIC20.82■□□□□ 0.92
TSPAN3O60637 AC233263.1-201ENST00000578059 224 ntBASIC20.82■□□□□ 0.92
TSPAN3O60637 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
TSPAN3O60637 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 AC007225.1-201ENST00000566331 1836 ntBASIC20.81■□□□□ 0.92
TSPAN3O60637 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TSPAN3O60637 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
TSPAN3O60637 AC005829.2-201ENST00000571422 1056 ntBASIC20.81■□□□□ 0.92
TSPAN3O60637 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.81■□□□□ 0.92
TSPAN3O60637 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.81■□□□□ 0.92
TSPAN3O60637 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC20.81■□□□□ 0.92
TSPAN3O60637 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.81■□□□□ 0.92
TSPAN3O60637 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.81■□□□□ 0.92
TSPAN3O60637 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
TSPAN3O60637 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
TSPAN3O60637 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 USP48-205ENST00000421625 2818 ntTSL 2 BASIC20.8■□□□□ 0.92
TSPAN3O60637 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
TSPAN3O60637 AL390719.1-204ENST00000412397 1219 ntBASIC20.8■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms