Protein–RNA interactions for Protein: O60260

PRKN, E3 ubiquitin-protein ligase parkin, humanhuman

Predicted RBP Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRKNO60260 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
PRKNO60260 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
PRKNO60260 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
PRKNO60260 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.83■□□□□ 0.6
PRKNO60260 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC18.83■□□□□ 0.6
PRKNO60260 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.83■□□□□ 0.6
PRKNO60260 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.83■□□□□ 0.6
PRKNO60260 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKNO60260 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC18.83■□□□□ 0.6
PRKNO60260 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PRKNO60260 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKNO60260 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKNO60260 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PRKNO60260 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKNO60260 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKNO60260 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.82■□□□□ 0.6
PRKNO60260 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKNO60260 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC18.82■□□□□ 0.6
PRKNO60260 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKNO60260 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRKNO60260 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PRKNO60260 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKNO60260 ABHD17AP1-201ENST00000358206 933 ntBASIC18.82■□□□□ 0.6
PRKNO60260 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.82■□□□□ 0.6
PRKNO60260 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
PRKNO60260 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.82■□□□□ 0.6
PRKNO60260 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PRKNO60260 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC18.82■□□□□ 0.6
PRKNO60260 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.82■□□□□ 0.6
PRKNO60260 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC18.82■□□□□ 0.6
PRKNO60260 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC18.81■□□□□ 0.6
PRKNO60260 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.81■□□□□ 0.6
PRKNO60260 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.81■□□□□ 0.6
PRKNO60260 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.81■□□□□ 0.6
PRKNO60260 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC18.81■□□□□ 0.6
PRKNO60260 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC18.81■□□□□ 0.6
PRKNO60260 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.81■□□□□ 0.6
PRKNO60260 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC18.81■□□□□ 0.6
PRKNO60260 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.81■□□□□ 0.6
PRKNO60260 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC18.81■□□□□ 0.6
PRKNO60260 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.8■□□□□ 0.6
PRKNO60260 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC18.8■□□□□ 0.6
PRKNO60260 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
PRKNO60260 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.8■□□□□ 0.6
PRKNO60260 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
PRKNO60260 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
PRKNO60260 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.79■□□□□ 0.6
PRKNO60260 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.79■□□□□ 0.6
PRKNO60260 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.79■□□□□ 0.6
PRKNO60260 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.79■□□□□ 0.6
PRKNO60260 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
PRKNO60260 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC18.79■□□□□ 0.6
PRKNO60260 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC18.79■□□□□ 0.6
PRKNO60260 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
PRKNO60260 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 LINC01006-201ENST00000333319 2292 ntBASIC18.79■□□□□ 0.6
PRKNO60260 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
PRKNO60260 SUSD1-204ENST00000374270 3124 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKNO60260 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRKNO60260 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKNO60260 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
PRKNO60260 MIF-AS1-201ENST00000406213 1476 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PRKNO60260 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC18.78■□□□□ 0.6
PRKNO60260 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PRKNO60260 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKNO60260 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.78■□□□□ 0.6
PRKNO60260 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
PRKNO60260 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PRKNO60260 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.78■□□□□ 0.6
PRKNO60260 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC18.78■□□□□ 0.6
PRKNO60260 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms