Protein–RNA interactions for Protein: O43541

SMAD6, Mothers against decapentaplegic homolog 6, humanhuman

Known RBP Predictions only

Length 496 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6O43541 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC20.47■□□□□ 0.87
SMAD6O43541 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD6O43541 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD6O43541 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD6O43541 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC20.47■□□□□ 0.87
SMAD6O43541 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
SMAD6O43541 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.47■□□□□ 0.87
SMAD6O43541 AC008687.6-201ENST00000596318 630 ntBASIC20.47■□□□□ 0.87
SMAD6O43541 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
SMAD6O43541 AC073648.6-201ENST00000641589 218 ntBASIC20.47■□□□□ 0.87
SMAD6O43541 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.47■□□□□ 0.87
SMAD6O43541 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD6O43541 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD6O43541 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD6O43541 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
SMAD6O43541 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
SMAD6O43541 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.46■□□□□ 0.87
SMAD6O43541 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SMAD6O43541 H19-201ENST00000411754 1788 ntTSL 5 BASIC20.46■□□□□ 0.87
SMAD6O43541 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC20.46■□□□□ 0.87
SMAD6O43541 PTBP1P-201ENST00000554374 1601 ntBASIC20.46■□□□□ 0.87
SMAD6O43541 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.46■□□□□ 0.87
SMAD6O43541 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.46■□□□□ 0.87
SMAD6O43541 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC20.46■□□□□ 0.87
SMAD6O43541 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.46■□□□□ 0.87
SMAD6O43541 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
SMAD6O43541 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC20.46■□□□□ 0.87
SMAD6O43541 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.46■□□□□ 0.87
SMAD6O43541 AC233263.1-201ENST00000578059 224 ntBASIC20.46■□□□□ 0.87
SMAD6O43541 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.46■□□□□ 0.87
SMAD6O43541 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
SMAD6O43541 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
SMAD6O43541 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
SMAD6O43541 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.46■□□□□ 0.87
SMAD6O43541 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.46■□□□□ 0.87
SMAD6O43541 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC20.45■□□□□ 0.86
SMAD6O43541 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
SMAD6O43541 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC20.45■□□□□ 0.86
SMAD6O43541 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SMAD6O43541 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.45■□□□□ 0.86
SMAD6O43541 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.45■□□□□ 0.86
SMAD6O43541 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
SMAD6O43541 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
SMAD6O43541 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.45■□□□□ 0.86
SMAD6O43541 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC20.44■□□□□ 0.86
SMAD6O43541 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC20.44■□□□□ 0.86
SMAD6O43541 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC20.44■□□□□ 0.86
SMAD6O43541 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SMAD6O43541 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SMAD6O43541 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC20.43■□□□□ 0.86
SMAD6O43541 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC20.43■□□□□ 0.86
SMAD6O43541 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SMAD6O43541 AC098590.1-201ENST00000468126 897 ntBASIC20.43■□□□□ 0.86
SMAD6O43541 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms