Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAFD1O14545 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAFD1O14545 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAFD1O14545 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC20.7■□□□□ 0.9
TRAFD1O14545 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
TRAFD1O14545 CYP21A1P-202ENST00000354927 1481 ntBASIC20.69■□□□□ 0.9
TRAFD1O14545 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAFD1O14545 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
TRAFD1O14545 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC20.69■□□□□ 0.9
TRAFD1O14545 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAFD1O14545 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAFD1O14545 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC20.69■□□□□ 0.9
TRAFD1O14545 SLC29A4P1-201ENST00000398760 971 ntBASIC20.69■□□□□ 0.9
TRAFD1O14545 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC20.69■□□□□ 0.9
TRAFD1O14545 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC20.69■□□□□ 0.9
TRAFD1O14545 PHB2-213ENST00000546111 858 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAFD1O14545 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAFD1O14545 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC20.69■□□□□ 0.9
TRAFD1O14545 AFG3L1P-217ENST00000557444 2447 ntBASIC20.69■□□□□ 0.9
TRAFD1O14545 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.69■□□□□ 0.9
TRAFD1O14545 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAFD1O14545 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
TRAFD1O14545 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.69■□□□□ 0.9
TRAFD1O14545 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAFD1O14545 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAFD1O14545 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.69■□□□□ 0.9
TRAFD1O14545 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.69■□□□□ 0.9
TRAFD1O14545 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
TRAFD1O14545 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
TRAFD1O14545 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAFD1O14545 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC20.68■□□□□ 0.9
TRAFD1O14545 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAFD1O14545 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAFD1O14545 MCRIP2P1-201ENST00000394346 511 ntBASIC20.68■□□□□ 0.9
TRAFD1O14545 MIPEPP3-201ENST00000412105 444 ntBASIC20.68■□□□□ 0.9
TRAFD1O14545 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAFD1O14545 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAFD1O14545 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.68■□□□□ 0.9
TRAFD1O14545 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.68■□□□□ 0.9
TRAFD1O14545 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.68■□□□□ 0.9
TRAFD1O14545 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
TRAFD1O14545 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
TRAFD1O14545 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAFD1O14545 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC20.68■□□□□ 0.9
TRAFD1O14545 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAFD1O14545 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAFD1O14545 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAFD1O14545 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC20.68■□□□□ 0.9
TRAFD1O14545 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAFD1O14545 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
TRAFD1O14545 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.68■□□□□ 0.9
TRAFD1O14545 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.68■□□□□ 0.9
TRAFD1O14545 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.67■□□□□ 0.9
TRAFD1O14545 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAFD1O14545 AC027702.1-201ENST00000563810 1770 ntBASIC20.67■□□□□ 0.9
TRAFD1O14545 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAFD1O14545 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAFD1O14545 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAFD1O14545 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAFD1O14545 AL138781.1-201ENST00000566567 1274 ntBASIC20.67■□□□□ 0.9
TRAFD1O14545 CYP2T3P-201ENST00000601990 817 ntBASIC20.67■□□□□ 0.9
TRAFD1O14545 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC20.67■□□□□ 0.9
TRAFD1O14545 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 AC073314.1-201ENST00000568729 2216 ntBASIC20.67■□□□□ 0.9
TRAFD1O14545 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC20.67■□□□□ 0.9
TRAFD1O14545 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
TRAFD1O14545 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAFD1O14545 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAFD1O14545 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAFD1O14545 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAFD1O14545 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAFD1O14545 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
TRAFD1O14545 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAFD1O14545 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
TRAFD1O14545 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAFD1O14545 AL355472.2-201ENST00000422958 438 ntBASIC20.66■□□□□ 0.9
TRAFD1O14545 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAFD1O14545 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAFD1O14545 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.66■□□□□ 0.9
TRAFD1O14545 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.66■□□□□ 0.9
TRAFD1O14545 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 19.5 ms