Protein–RNA interactions for Protein: O00303

EIF3F, Eukaryotic translation initiation factor 3 subunit F, humanhuman

Predicted RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3FO00303 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC19.8■□□□□ 0.76
EIF3FO00303 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
EIF3FO00303 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.8■□□□□ 0.76
EIF3FO00303 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3FO00303 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3FO00303 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3FO00303 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3FO00303 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3FO00303 AC093787.1-201ENST00000450396 207 ntBASIC19.79■□□□□ 0.76
EIF3FO00303 AF201337.1-201ENST00000520239 748 ntBASIC19.79■□□□□ 0.76
EIF3FO00303 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC19.79■□□□□ 0.76
EIF3FO00303 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
EIF3FO00303 AL050303.2-201ENST00000619798 666 ntBASIC19.79■□□□□ 0.76
EIF3FO00303 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC19.79■□□□□ 0.76
EIF3FO00303 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC19.79■□□□□ 0.76
EIF3FO00303 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.79■□□□□ 0.76
EIF3FO00303 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
EIF3FO00303 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.79■□□□□ 0.76
EIF3FO00303 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
EIF3FO00303 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3FO00303 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3FO00303 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC19.78■□□□□ 0.76
EIF3FO00303 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3FO00303 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
EIF3FO00303 MIR663A-201ENST00000385250 93 ntBASIC19.78■□□□□ 0.76
EIF3FO00303 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.78■□□□□ 0.76
EIF3FO00303 HES2-205ENST00000487437 968 ntTSL 3 BASIC19.78■□□□□ 0.76
EIF3FO00303 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.78■□□□□ 0.76
EIF3FO00303 OAS3-207ENST00000551007 998 ntTSL 2 BASIC19.78■□□□□ 0.76
EIF3FO00303 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3FO00303 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
EIF3FO00303 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3FO00303 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC19.78■□□□□ 0.76
EIF3FO00303 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
EIF3FO00303 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
EIF3FO00303 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.77■□□□□ 0.76
EIF3FO00303 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 STK25-205ENST00000405883 1904 ntTSL 2 BASIC19.77■□□□□ 0.76
EIF3FO00303 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 CROCCP5-201ENST00000436658 830 ntBASIC19.77■□□□□ 0.76
EIF3FO00303 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC19.77■□□□□ 0.76
EIF3FO00303 BRWD1-AS2-201ENST00000603064 1028 ntBASIC19.77■□□□□ 0.76
EIF3FO00303 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
EIF3FO00303 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
EIF3FO00303 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EIF3FO00303 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EIF3FO00303 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.77■□□□□ 0.75
EIF3FO00303 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EIF3FO00303 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.75
EIF3FO00303 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
EIF3FO00303 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.76■□□□□ 0.75
EIF3FO00303 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.76■□□□□ 0.75
EIF3FO00303 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC19.76■□□□□ 0.75
EIF3FO00303 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.76■□□□□ 0.75
EIF3FO00303 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
EIF3FO00303 AL355472.2-201ENST00000422958 438 ntBASIC19.76■□□□□ 0.75
EIF3FO00303 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
EIF3FO00303 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.76■□□□□ 0.75
EIF3FO00303 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.76■□□□□ 0.75
EIF3FO00303 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
EIF3FO00303 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms