Protein–RNA interactions for Protein: O00299

CLIC1, Chloride intracellular channel protein 1, humanhuman

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC1O00299 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC1O00299 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC1O00299 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
CLIC1O00299 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC1O00299 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.05■□□□□ 0.64
CLIC1O00299 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 AC125437.2-201ENST00000625180 2167 ntBASIC19.05■□□□□ 0.64
CLIC1O00299 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CLIC1O00299 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC19.05■□□□□ 0.64
CLIC1O00299 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.05■□□□□ 0.64
CLIC1O00299 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.05■□□□□ 0.64
CLIC1O00299 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
CLIC1O00299 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC19.04■□□□□ 0.64
CLIC1O00299 AC019069.1-201ENST00000610008 1333 ntBASIC19.04■□□□□ 0.64
CLIC1O00299 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIC1O00299 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 MIR638-201ENST00000385237 100 ntBASIC19.04■□□□□ 0.64
CLIC1O00299 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.04■□□□□ 0.64
CLIC1O00299 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIC1O00299 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC19.04■□□□□ 0.64
CLIC1O00299 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.04■□□□□ 0.64
CLIC1O00299 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.04■□□□□ 0.64
CLIC1O00299 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CLIC1O00299 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIC1O00299 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.03■□□□□ 0.64
CLIC1O00299 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
CLIC1O00299 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIC1O00299 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC19.03■□□□□ 0.64
CLIC1O00299 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.03■□□□□ 0.64
CLIC1O00299 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CLIC1O00299 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
CLIC1O00299 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.03■□□□□ 0.64
CLIC1O00299 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC19.02■□□□□ 0.64
CLIC1O00299 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC1O00299 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.02■□□□□ 0.64
CLIC1O00299 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC1O00299 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC1O00299 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC1O00299 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC19.02■□□□□ 0.64
CLIC1O00299 CDV3P1-201ENST00000471403 739 ntBASIC19.02■□□□□ 0.64
CLIC1O00299 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.02■□□□□ 0.64
CLIC1O00299 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.02■□□□□ 0.64
CLIC1O00299 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.02■□□□□ 0.64
CLIC1O00299 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC1O00299 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC1O00299 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
CLIC1O00299 ST7-OT4-201ENST00000397750 1576 ntTSL 1 (best) BASIC19.02■□□□□ 0.63
CLIC1O00299 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC19.02■□□□□ 0.63
CLIC1O00299 AL691432.2-201ENST00000607222 2038 ntBASIC19.01■□□□□ 0.63
CLIC1O00299 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC19.01■□□□□ 0.63
CLIC1O00299 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC19.01■□□□□ 0.63
CLIC1O00299 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC19.01■□□□□ 0.63
CLIC1O00299 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC19.01■□□□□ 0.63
CLIC1O00299 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC19.01■□□□□ 0.63
CLIC1O00299 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
CLIC1O00299 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.01■□□□□ 0.63
CLIC1O00299 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
CLIC1O00299 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.01■□□□□ 0.63
CLIC1O00299 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CLIC1O00299 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
CLIC1O00299 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC19■□□□□ 0.63
CLIC1O00299 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC1O00299 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19■□□□□ 0.63
CLIC1O00299 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
CLIC1O00299 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
CLIC1O00299 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms