Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3B1O00203 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
AP3B1O00203 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.43■□□□□ 0.86
AP3B1O00203 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC20.43■□□□□ 0.86
AP3B1O00203 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3B1O00203 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
AP3B1O00203 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 MCRIP2P1-201ENST00000394346 511 ntBASIC20.42■□□□□ 0.86
AP3B1O00203 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC20.42■□□□□ 0.86
AP3B1O00203 RARRES2P4-201ENST00000514074 484 ntBASIC20.42■□□□□ 0.86
AP3B1O00203 RARRES2P6-201ENST00000567333 442 ntBASIC20.42■□□□□ 0.86
AP3B1O00203 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.42■□□□□ 0.86
AP3B1O00203 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.42■□□□□ 0.86
AP3B1O00203 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
AP3B1O00203 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
AP3B1O00203 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.42■□□□□ 0.86
AP3B1O00203 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.41■□□□□ 0.86
AP3B1O00203 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.41■□□□□ 0.86
AP3B1O00203 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.41■□□□□ 0.86
AP3B1O00203 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 BET1L-204ENST00000410108 637 ntTSL 3 BASIC20.41■□□□□ 0.86
AP3B1O00203 AC026271.2-201ENST00000428091 497 ntBASIC20.41■□□□□ 0.86
AP3B1O00203 AC006015.1-201ENST00000429970 570 ntBASIC20.41■□□□□ 0.86
AP3B1O00203 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC20.41■□□□□ 0.86
AP3B1O00203 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
AP3B1O00203 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC20.41■□□□□ 0.86
AP3B1O00203 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC20.41■□□□□ 0.86
AP3B1O00203 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
AP3B1O00203 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
AP3B1O00203 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
AP3B1O00203 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3B1O00203 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3B1O00203 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.4■□□□□ 0.86
AP3B1O00203 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3B1O00203 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP3B1O00203 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3B1O00203 TCF3P1-201ENST00000423021 1937 ntBASIC20.4■□□□□ 0.86
AP3B1O00203 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC20.4■□□□□ 0.86
AP3B1O00203 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC20.4■□□□□ 0.86
AP3B1O00203 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
AP3B1O00203 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC20.4■□□□□ 0.86
AP3B1O00203 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
AP3B1O00203 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
AP3B1O00203 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP3B1O00203 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
AP3B1O00203 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.86
AP3B1O00203 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
AP3B1O00203 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
AP3B1O00203 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC20.39■□□□□ 0.86
AP3B1O00203 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
AP3B1O00203 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.86
AP3B1O00203 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.39■□□□□ 0.86
AP3B1O00203 CD37-204ENST00000535669 1674 ntTSL 2 BASIC20.39■□□□□ 0.86
AP3B1O00203 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.39■□□□□ 0.85
AP3B1O00203 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC20.39■□□□□ 0.85
AP3B1O00203 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.39■□□□□ 0.85
AP3B1O00203 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC20.39■□□□□ 0.85
AP3B1O00203 DUX4L16-201ENST00000555130 1264 ntBASIC20.39■□□□□ 0.85
AP3B1O00203 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 AC069236.1-201ENST00000604339 616 ntBASIC20.39■□□□□ 0.85
AP3B1O00203 AC016405.3-201ENST00000607710 860 ntBASIC20.39■□□□□ 0.85
AP3B1O00203 MIR5787-201ENST00000611784 55 ntBASIC20.39■□□□□ 0.85
AP3B1O00203 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.39■□□□□ 0.85
AP3B1O00203 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 AC231657.2-201ENST00000624556 255 ntBASIC20.39■□□□□ 0.85
AP3B1O00203 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
AP3B1O00203 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
AP3B1O00203 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC20.38■□□□□ 0.85
AP3B1O00203 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC20.38■□□□□ 0.85
AP3B1O00203 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC20.38■□□□□ 0.85
AP3B1O00203 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
AP3B1O00203 METTL26-203ENST00000397664 604 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms