Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 ALYREF-202ENST00000505490 1088 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 AL356309.3-201ENST00000624132 1934 ntBASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 KCNC2-204ENST00000540018 2168 ntAPPRIS ALT2 TSL 2 BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC11.28□□□□□ -0.6
CHKB-CPT1BH3BT56 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC11.27□□□□□ -0.6
CHKB-CPT1BH3BT56 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 ADK-206ENST00000541550 2222 ntTSL 2 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 TBC1D24-205ENST00000567020 6673 ntAPPRIS P3 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 CD37-213ENST00000598095 1598 ntTSL 2 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC11.27□□□□□ -0.61
CHKB-CPT1BH3BT56 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 SPRED3-204ENST00000587013 1539 ntTSL 5 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 ALDH1A3-203ENST00000557963 1670 ntBASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC11.26□□□□□ -0.61
CHKB-CPT1BH3BT56 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 FEM1AP4-201ENST00000443167 1987 ntBASIC11.25□□□□□ -0.61
CHKB-CPT1BH3BT56 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms