Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TCF3P1-201ENST00000423021 1937 ntBASIC16.29■□□□□ 0.2
SRRM4A7MD48 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM4A7MD48 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM4A7MD48 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM4A7MD48 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 AC016769.1-201ENST00000409132 1010 ntBASIC16.28■□□□□ 0.2
SRRM4A7MD48 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 AC006015.1-201ENST00000429970 570 ntBASIC16.28■□□□□ 0.2
SRRM4A7MD48 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM4A7MD48 AL162412.1-201ENST00000567129 965 ntBASIC16.28■□□□□ 0.2
SRRM4A7MD48 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM4A7MD48 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM4A7MD48 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SRRM4A7MD48 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.28■□□□□ 0.2
SRRM4A7MD48 CYP21A1P-202ENST00000354927 1481 ntBASIC16.28■□□□□ 0.2
SRRM4A7MD48 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM4A7MD48 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM4A7MD48 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM4A7MD48 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM4A7MD48 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM4A7MD48 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 CNN2P6-201ENST00000439038 900 ntBASIC16.27■□□□□ 0.2
SRRM4A7MD48 AL162430.1-201ENST00000480705 870 ntBASIC16.27■□□□□ 0.2
SRRM4A7MD48 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM4A7MD48 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
SRRM4A7MD48 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SRRM4A7MD48 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM4A7MD48 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM4A7MD48 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM4A7MD48 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM4A7MD48 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM4A7MD48 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
SRRM4A7MD48 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
SRRM4A7MD48 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.27■□□□□ 0.19
SRRM4A7MD48 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
SRRM4A7MD48 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC16.27■□□□□ 0.19
SRRM4A7MD48 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 AL356652.1-201ENST00000615962 565 ntBASIC16.26■□□□□ 0.19
SRRM4A7MD48 ANKRD20A6P-201ENST00000618763 204 ntBASIC16.26■□□□□ 0.19
SRRM4A7MD48 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 AC068338.2-201ENST00000563278 1430 ntBASIC16.26■□□□□ 0.19
SRRM4A7MD48 AC087633.2-202ENST00000565166 1439 ntBASIC16.26■□□□□ 0.19
SRRM4A7MD48 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SRRM4A7MD48 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
SRRM4A7MD48 STK25-205ENST00000405883 1904 ntTSL 2 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC16.25■□□□□ 0.19
SRRM4A7MD48 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SRRM4A7MD48 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms