Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TMEM235A6NFC5 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 AIRN-201ENST00000601203 4374 ntBASIC17.22■□□□□ 0.35
TMEM235A6NFC5 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 AC245052.3-201ENST00000450182 901 ntBASIC17.22■□□□□ 0.35
TMEM235A6NFC5 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC17.22■□□□□ 0.35
TMEM235A6NFC5 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TMEM235A6NFC5 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
TMEM235A6NFC5 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.21■□□□□ 0.34
TMEM235A6NFC5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC17.21■□□□□ 0.34
TMEM235A6NFC5 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 H19-201ENST00000411754 1788 ntTSL 5 BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 AL691432.2-201ENST00000607222 2038 ntBASIC17.2■□□□□ 0.34
TMEM235A6NFC5 MIR572-201ENST00000384983 95 ntBASIC17.2■□□□□ 0.34
TMEM235A6NFC5 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 AC027682.1-201ENST00000562846 899 ntBASIC17.2■□□□□ 0.34
TMEM235A6NFC5 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
TMEM235A6NFC5 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 GSDMD-212ENST00000533063 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 AC120498.9-201ENST00000339021 3867 ntBASIC17.19■□□□□ 0.34
TMEM235A6NFC5 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 TNXA-203ENST00000507684 2038 ntBASIC17.19■□□□□ 0.34
TMEM235A6NFC5 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TMEM235A6NFC5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms