Protein–RNA interactions for Protein: A1X283

SH3PXD2B, SH3 and PX domain-containing protein 2B, humanhuman

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3PXD2BA1X283 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 AL158211.5-201ENST00000623583 2518 ntBASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
SH3PXD2BA1X283 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 MPST-204ENST00000404393 1329 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 RARRES2P6-201ENST00000567333 442 ntBASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
SH3PXD2BA1X283 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 AC112907.3-201ENST00000577781 2400 ntBASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 AC099778.1-201ENST00000568593 1911 ntBASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
SH3PXD2BA1X283 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3PXD2BA1X283 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.83■□□□□ 0.61
SH3PXD2BA1X283 ZFAND2B-202ENST00000409097 1765 ntTSL 2 BASIC18.83■□□□□ 0.61
SH3PXD2BA1X283 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SH3PXD2BA1X283 STAC-204ENST00000457375 1366 ntTSL 2 BASIC18.83■□□□□ 0.61
SH3PXD2BA1X283 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SH3PXD2BA1X283 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.83■□□□□ 0.61
SH3PXD2BA1X283 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 AC012414.1-201ENST00000556676 535 ntBASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC18.83■□□□□ 0.6
SH3PXD2BA1X283 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 POLR2H-204ENST00000438240 994 ntTSL 3 BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 CPT2-209ENST00000636935 803 ntTSL 5 BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 KIAA0895L-206ENST00000563902 2233 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SH3PXD2BA1X283 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SH3PXD2BA1X283 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms