Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 AC099778.1-201ENST00000568593 1911 ntBASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
TRBV6-4A0A1B0GX49 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 MCRIP2P1-201ENST00000394346 511 ntBASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 RARRES2P4-201ENST00000514074 484 ntBASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC011767.1-201ENST00000617410 1153 ntBASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 ANKRD20A6P-201ENST00000618763 204 ntBASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC231657.2-201ENST00000624556 255 ntBASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
TRBV6-4A0A1B0GX49 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 DPP3P2-201ENST00000416030 1696 ntBASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 DUX4L16-201ENST00000555130 1264 ntBASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC069236.1-201ENST00000604339 616 ntBASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC016405.3-201ENST00000607710 860 ntBASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
TRBV6-4A0A1B0GX49 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 PRELID3B-201ENST00000355937 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 AL162430.1-201ENST00000480705 870 ntBASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 PLLP-204ENST00000569059 665 ntTSL 3 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 AC008694.1-202ENST00000636953 945 ntBASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
TRBV6-4A0A1B0GX49 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms