Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC23.54■■□□□ 1.36
CCDC196A0A1B0GTZ2 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 AC092118.2-201ENST00000613495 667 ntBASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 PFKL-212ENST00000628044 129 ntTSL 3 BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC23.53■■□□□ 1.36
CCDC196A0A1B0GTZ2 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 DPP3P2-201ENST00000416030 1696 ntBASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 MIR4758-201ENST00000577688 71 ntBASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 AL109923.1-201ENST00000618799 583 ntBASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 AL162377.1-201ENST00000618844 1793 ntBASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC23.52■■□□□ 1.36
CCDC196A0A1B0GTZ2 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC23.52■■□□□ 1.35
CCDC196A0A1B0GTZ2 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC23.52■■□□□ 1.35
CCDC196A0A1B0GTZ2 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
CCDC196A0A1B0GTZ2 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 AL512408.1-201ENST00000569378 2000 ntBASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.5■■□□□ 1.35
CCDC196A0A1B0GTZ2 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC23.49■■□□□ 1.35
CCDC196A0A1B0GTZ2 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
CCDC196A0A1B0GTZ2 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC23.48■■□□□ 1.35
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms