Protein–RNA interactions for Protein: A0A0B7P3V8

TY4B-P, Transposon Ty4-P Gag-Pol polyprotein, yeast

Predictions only

Length 1,104 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
TY4B-P	A0A0B7P3V8	MPT5	YGL178W	2580 nt		3.08	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	NUP120	YKL057C	3114 nt		3.08	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	FIR1	YER032W	2631 nt		3.08	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	SNQ2	YDR011W	4506 nt		3.08	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	CLN3	YAL040C	1743 nt		3.08	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	PTC5	YOR090C	1719 nt		3.08	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	SPO21	YOL091W	1830 nt		3.08	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	DYN1	YKR054C	12279 nt		3.07	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	ISW1	YBR245C	3390 nt		3.07	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	NPR3	YHL023C	3441 nt		3.07	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	TFC8	YPL007C	1767 nt		3.07	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	UBP14	YBR058C	2346 nt		3.07	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	NAB3	YPL190C	2409 nt		3.07	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	ECM21	YBL101C	3354 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	PMP2	YEL017C-A	132 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	BRP1	YGL007W	378 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	FLO5	YHR211W	3228 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	MCM10	YIL150C	1716 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	ORC1	YML065W	2745 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YOR073W-A	YOR073W-A	234 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	SAK1	YER129W	3429 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	CHO2	YGR157W	2610 nt		3.06	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YLR149C	YLR149C	2193 nt		3.05	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YLR278C	YLR278C	4026 nt		3.05	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	SPO14	YKR031C	5052 nt		3.05	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YOL019W-A	YOL019W-A	153 nt		3.05	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	LCL1	YPL056C	306 nt		3.05	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	VPS34	YLR240W	2628 nt		3.05	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YTA7	YGR270W	4140 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	ESL1	YIL151C	3357 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	COY1	YKL179C	2040 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YDR182W-A	YDR182W-A	204 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YLR154W-A	YLR154W-A	186 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	RPS17A	YML024W	411 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YNL103W-A	YNL103W-A	90 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	TOP2	YNL088W	4287 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	IKI3	YLR384C	4050 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	VPS35	YJL154C	2835 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	GCV2	YMR189W	3105 nt		3.04	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	GRR1	YJR090C	3456 nt		3.03	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YHL015W-A	YHL015W-A	84 nt		3.03	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	YJL022W	YJL022W	309 nt		3.03	□□□□□ -1.92
TY4B-P	A0A0B7P3V8	PRP8	YHR165C	7242 nt		3.02	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	ELG1	YOR144C	2376 nt		3.02	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	CHS2	YBR038W	2892 nt		3.02	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	YOR072W-B	YOR072W-B	162 nt		3.02	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	ACM1	YPL267W	630 nt		3.02	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	SIR3	YLR442C	2937 nt		3.01	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	EMC6	YLL014W	327 nt		3.01	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	YLR146W-A	YLR146W-A	189 nt		3.01	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	SEF1	YBL066C	3447 nt		3.01	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	DRS2	YAL026C	4068 nt		3.01	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	PXA2	YKL188C	2562 nt		3.01	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	MOT1	YPL082C	5604 nt		3	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	YDR239C	YDR239C	2364 nt		3	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	RPB10	YOR210W	213 nt		3	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	UBP11	YKR098C	2154 nt		3	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	PFF1	YBR074W	2931 nt		2.99	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	RPL6A	YML073C	531 nt		2.99	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	RRP12	YPL012W	3687 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	YDR341C	YDR341C	1824 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	SLH1	YGR271W	5904 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	YGR050C	YGR050C	357 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	YOR102W	YOR102W	351 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	SMY2	YBR172C	2223 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	MMS1	YPR164W	4224 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	YKU80	YMR106C	1890 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	TOR1	YJR066W	7413 nt		2.98	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	HYP2	YEL034W	474 nt		2.97	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	RPS29A	YLR388W	171 nt		2.97	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	RGM1	YMR182C	636 nt		2.97	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	ESC1	YMR219W	4977 nt		2.97	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	FAR11	YNL127W	2862 nt		2.97	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	SNF5	YBR289W	2718 nt		2.97	□□□□□ -1.93
TY4B-P	A0A0B7P3V8	ATG13	YPR185W	2217 nt		2.96	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	SWI6	YLR182W	2412 nt		2.96	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	snR76	snR76	109 nt		2.96	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	snR43	snR43	209 nt		2.96	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	snR61	snR61	90 nt		2.95	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YER053C-A	YER053C-A	114 nt		2.95	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	SBH1	YER087C-B	249 nt		2.95	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	tQ(UUG)B	tQ(UUG)B	72 nt		2.95	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YBR099C	YBR099C	384 nt		2.95	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YBR174C	YBR174C	315 nt		2.95	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YBT1	YLL048C	4986 nt		2.95	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YIL169C	YIL169C	2988 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	TFC4	YGR047C	3078 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	SMY1	YKL079W	1971 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	RPS12	YOR369C	432 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	KSP1	YHR082C	3090 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YDR098C-B	YDR098C-B	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YDR210C-D	YDR210C-D	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YDR316W-B	YDR316W-B	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YDR365W-B	YDR365W-B	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YER138C	YER138C	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YER160C	YER160C	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YGR038C-B	YGR038C-B	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YGR161C-D	YGR161C-D	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YJR027W	YJR027W	5268 nt		2.94	□□□□□ -1.94
TY4B-P	A0A0B7P3V8	YLR157C-B	YLR157C-B	5268 nt		2.94	□□□□□ -1.94

Retrieved 100 of 7,029 protein–RNA pairs in 6.9 ms