Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 AC092720.2-201ENST00000602388 1665 ntBASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 AC099791.1-201ENST00000416440 715 ntBASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 AC061975.6-201ENST00000579045 1553 ntBASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
TRAV13-1A0A0B4J241 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 BZW1-202ENST00000409226 2455 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 AC087289.5-201ENST00000586076 3175 ntBASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
TRAV13-1A0A0B4J241 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 AC053503.5-201ENST00000601508 636 ntBASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
TRAV13-1A0A0B4J241 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
TRAV13-1A0A0B4J241 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms