Protein–RNA interactions for Protein: A0A0A6YYK1

TRAV8-1, T-cell receptor alpha variable 8-1 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-1A0A0A6YYK1 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RARRES2P11-201ENST00000635158 484 ntBASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
TRAV8-1A0A0A6YYK1 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-1A0A0A6YYK1 WASH6P-203ENST00000460206 1826 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAV8-1A0A0A6YYK1 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC15.33■□□□□ 0.05
TRAV8-1A0A0A6YYK1 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15.33■□□□□ 0.05
TRAV8-1A0A0A6YYK1 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.05
TRAV8-1A0A0A6YYK1 AP000974.1-201ENST00000623909 2387 ntBASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC027682.1-201ENST00000562846 899 ntBASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC008175.2-201ENST00000612840 297 ntBASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MIR572-201ENST00000384983 95 ntBASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MIR2861-201ENST00000636310 90 ntBASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
TRAV8-1A0A0A6YYK1 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 POU5F1P4-201ENST00000413175 1085 ntBASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MAG-206ENST00000597035 542 ntTSL 4 BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 GRAMD4P4-201ENST00000613563 1115 ntBASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
TRAV8-1A0A0A6YYK1 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms