Protein–RNA interactions for Protein: A0A075B6T8

TRAV9-1, T-cell receptor alpha variable 9-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-1A0A075B6T8 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 BX005040.4-201ENST00000637145 1518 ntBASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TRAV9-1A0A075B6T8 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 STK25-205ENST00000405883 1904 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 AC135050.7-201ENST00000624508 2218 ntBASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
TRAV9-1A0A075B6T8 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 STK25-204ENST00000405585 1643 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 AC139795.1-202ENST00000500444 432 ntBASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
TRAV9-1A0A075B6T8 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 BCL2-203ENST00000589955 5011 ntBASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 AC133637.1-201ENST00000624115 1537 ntBASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC15.17■□□□□ 0.02
TRAV9-1A0A075B6T8 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC15.16■□□□□ 0.02
TRAV9-1A0A075B6T8 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms