Protein–RNA interactions for Protein: Q96RF0

SNX18, Sorting nexin-18, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18Q96RF0 PRYP4-201ENST00000306589 444 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 IKZF3-205ENST00000350532 1413 ntTSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 IKZF3-206ENST00000351680 1413 ntTSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CCL7-202ENST00000394627 696 ntTSL 3 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 XIRP2-206ENST00000409728 3391 ntAPPRIS ALT2 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 EPHA4-203ENST00000409938 3363 ntAPPRIS P1 TSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 TRIM48-201ENST00000417545 1445 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC006455.4-201ENST00000418297 528 ntTSL 4 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 RPL12P14-201ENST00000431782 490 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 TISP43-205ENST00000440359 543 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC243962.1-201ENST00000441512 579 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC073188.4-201ENST00000450077 528 ntTSL 4 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC002463.1-201ENST00000453459 1188 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 PHBP9-201ENST00000453578 825 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 RPSAP54-201ENST00000454001 886 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 RN7SL74P-201ENST00000464966 299 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 SLC17A1-203ENST00000468082 1242 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 RN7SL448P-201ENST00000475566 295 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 TRIM2-207ENST00000482578 773 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC008481.2-201ENST00000483614 531 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 FAM71F1-207ENST00000485070 1574 ntTSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 LINC02111-201ENST00000505158 2312 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC025244.1-201ENST00000505930 469 ntTSL 3 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC008667.3-201ENST00000506892 553 ntTSL 4 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 RNA5SP159-201ENST00000517161 103 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 RPL10P9-201ENST00000522551 645 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 AP002469.1-201ENST00000526011 1043 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 CRYAB-212ENST00000533280 545 ntTSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CCDC60-204ENST00000539847 581 ntAPPRIS ALT2 TSL 3 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 PARD3-212ENST00000544292 2475 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AL355922.4-201ENST00000555642 449 ntTSL 3 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC007375.2-201ENST00000557752 603 ntAPPRIS P1 TSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC007495.2-201ENST00000562822 459 ntTSL 3 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC007066.2-202ENST00000566531 914 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 LINC00854-204ENST00000594691 649 ntAPPRIS P5 TSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 ZNF559-ZNF177-205ENST00000602856 419 ntTSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 PRYP3-202ENST00000607210 444 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 AL133445.2-201ENST00000611191 527 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 GZMB-209ENST00000616551 559 ntTSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 FAM71F1-209ENST00000621392 1591 ntTSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 RBMS3-AS2-207ENST00000629416 456 ntTSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 KLRD1-201ENST00000336164 3258 ntAPPRIS P4 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CCL28-201ENST00000361115 3126 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 TLR4-201ENST00000355622 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 NAPEPLD-209ENST00000465647 2380 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CLOCK-202ENST00000381322 4059 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 TBX5-AS1-201ENST00000528549 3620 ntTSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 PSMC1P12-201ENST00000436509 1314 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 AC139256.1-201ENST00000569858 2598 ntTSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 ADGRL3-205ENST00000506746 4935 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 NR2F1-AS1-208ENST00000606233 2264 ntTSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CDC25C-201ENST00000323760 2128 ntAPPRIS P1 TSL 1 (best) BASIC7.48□□□□□ -1.21
SNX18Q96RF0 LRRC37A17P-201ENST00000570311 4693 ntBASIC7.48□□□□□ -1.21
SNX18Q96RF0 IL1RL1-203ENST00000404917 3571 ntTSL 2 BASIC7.48□□□□□ -1.21
SNX18Q96RF0 CEP95-201ENST00000553412 2492 ntAPPRIS ALT2 TSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 UMAD1-206ENST00000636849 2157 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ZFP2-202ENST00000520301 2043 ntAPPRIS P1 TSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 LINC02209-201ENST00000521245 2651 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 OR7D2-203ENST00000642043 3157 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 PIGA-201ENST00000333590 3652 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 NDUFS1-204ENST00000440274 2394 ntTSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 PDE6A-205ENST00000617647 4039 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 CDH6-201ENST00000265071 8476 ntAPPRIS P1 TSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 MTPN-201ENST00000393085 3738 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 WDR87-202ENST00000447313 9009 ntAPPRIS ALT2 TSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ZNF826P-204ENST00000597334 1446 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC068733.2-201ENST00000605434 1418 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 NUCB2-208ENST00000529010 2274 ntAPPRIS P2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 C2CD5-218ENST00000545552 3471 ntTSL 2 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 MIR425-201ENST00000362162 87 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 RN7SKP48-201ENST00000365031 328 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 IGHV1-24-201ENST00000390610 411 ntAPPRIS P1 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC008171.1-201ENST00000395058 200 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 SERPINB8-204ENST00000397988 1178 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 TOMM6-201ENST00000398881 595 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC006460.1-201ENST00000421437 808 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 SOX9-AS1-203ENST00000424417 576 ntTSL 4 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AL035045.1-201ENST00000425405 632 ntTSL 3 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 VOPP1-205ENST00000427700 632 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 MTRF1-204ENST00000430347 557 ntTSL 5 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 LINC01865-201ENST00000430529 845 ntTSL 3 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 OR6C71P-201ENST00000432580 913 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 FUNDC2P4-201ENST00000441207 421 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 PRB4-202ENST00000445719 586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 RPL21P92-201ENST00000454107 476 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC087501.2-201ENST00000466869 581 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC009108.1-201ENST00000473913 796 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 RN7SL472P-201ENST00000492799 293 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 PDE4D-209ENST00000502575 1040 ntTSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC114812.3-201ENST00000509542 730 ntBASIC7.47□□□□□ -1.21
SNX18Q96RF0 AC015909.1-201ENST00000509943 839 ntTSL 3 BASIC7.47□□□□□ -1.21
SNX18Q96RF0 GNGT2-205ENST00000511673 500 ntAPPRIS P1 TSL 1 (best) BASIC7.47□□□□□ -1.21
SNX18Q96RF0 ACTR6P1-201ENST00000514311 1104 ntBASIC7.47□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms