Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 HNF1A-AS1-202ENST00000535301 536 ntTSL 4 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 LINC02407-202ENST00000553247 1083 ntTSL 3 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 LINC01397-201ENST00000554808 579 ntTSL 4 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AC090287.1-201ENST00000578374 291 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 MIR3187-201ENST00000583431 70 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AC007292.3-201ENST00000594776 357 ntTSL 5 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 MIR6762-201ENST00000613340 86 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AC008147.4-201ENST00000617570 1204 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AC026336.5-201ENST00000624455 738 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AL589666.2-201ENST00000624603 618 ntBASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 SPATS2L-227ENST00000619961 6115 ntTSL 2 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 LPIN1-202ENST00000396097 5690 ntTSL 5 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 CCPG1-212ENST00000569205 2970 ntTSL 2 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AL161756.1-201ENST00000555861 1751 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 RTN3-202ENST00000339997 4886 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 CU633906.2-201ENST00000624576 2257 ntTSL 5 BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 AC068512.1-201ENST00000584542 1811 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 DGKG-202ENST00000344484 3445 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
CDK5RAP1Q96SZ6 TMEM87A-202ENST00000389834 3109 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 USP47-203ENST00000399455 7396 ntAPPRIS ALT2 TSL 5 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 HELLS-206ENST00000394045 2699 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 ACTBP13-201ENST00000423971 3959 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 PIWIL4-201ENST00000299001 3199 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC007614.2-201ENST00000569877 1851 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 CNPY1-201ENST00000321736 2378 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 PTPRK-206ENST00000368215 4651 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 ANKRD42-202ENST00000393389 4066 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF23-204ENST00000428724 1932 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 KIAA0753-207ENST00000572370 3263 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 NLRP9-201ENST00000332836 3484 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 SERPINB12-201ENST00000269491 1218 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 RFX3-202ENST00000358730 2971 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 LEMD1-202ENST00000367151 869 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 LEMD1-204ENST00000367153 929 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 FCGR3B-202ENST00000367964 2143 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 MIR614-201ENST00000385082 90 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 LEMD1-206ENST00000391936 727 ntTSL 5 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AL139274.1-201ENST00000402374 936 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 RPS6P25-201ENST00000464444 748 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 CCL26-201ENST00000005180 526 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC090193.2-201ENST00000518970 537 ntTSL 4 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC099687.1-201ENST00000531798 510 ntTSL 3 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AL590560.1-203ENST00000544342 408 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC116348.1-201ENST00000562525 528 ntTSL 3 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC009171.1-201ENST00000572673 266 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC009121.1-201ENST00000574681 1095 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC006557.4-201ENST00000585516 830 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC093063.1-201ENST00000599317 363 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC010320.1-201ENST00000599775 578 ntTSL 3 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC005034.2-201ENST00000604464 414 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 RN7SL82P-201ENST00000611435 237 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC123788.2-201ENST00000612290 283 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 MIR6737-201ENST00000617385 70 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 RN7SL628P-201ENST00000619139 237 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC108724.2-201ENST00000634593 290 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 KLF8-206ENST00000640927 1150 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF343-208ENST00000617391 3300 ntTSL 4 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 MICAL2-202ENST00000342902 3711 ntAPPRIS ALT2 TSL 2 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 GLYATL2-202ENST00000532258 1488 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 NANOG-201ENST00000229307 5183 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 ALMS1-206ENST00000613296 12925 ntAPPRIS P2 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AHCYL2-208ENST00000474594 2047 ntTSL 2 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 AC008537.3-201ENST00000623128 1881 ntBASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 CASR-201ENST00000490131 4015 ntTSL 5 BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 URB1-201ENST00000382751 10832 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 CACNB2-201ENST00000282343 3524 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
CDK5RAP1Q96SZ6 HEATR6-201ENST00000184956 3932 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 MSN-201ENST00000360270 3944 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 FDFT1-212ENST00000528643 1909 ntTSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 APEX2-201ENST00000374987 3245 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 ADH7-205ENST00000482593 1420 ntTSL 3 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 PBRM1-203ENST00000356770 7523 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 MITF-203ENST00000328528 4680 ntTSL 5 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 R3HCC1L-203ENST00000370584 3372 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 LINC01182-202ENST00000510907 2228 ntTSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 ZNF484-203ENST00000395505 3960 ntAPPRIS ALT2 TSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 SOCS6-203ENST00000582322 2625 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC105046.1-201ENST00000566457 4997 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 NASP-201ENST00000350030 3207 ntAPPRIS P4 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 PTTG1-201ENST00000352433 753 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AL035698.1-201ENST00000405812 564 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC068481.1-201ENST00000415520 530 ntTSL 4 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 RPL3P4-201ENST00000417615 423 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC013470.3-201ENST00000420252 1194 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AL671986.1-201ENST00000422197 955 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 TRBV10-2-201ENST00000426318 395 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 HMGN2P24-201ENST00000433516 273 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 C5orf24-203ENST00000435259 851 ntAPPRIS P1 TSL 3 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 LINC01865-202ENST00000436808 853 ntTSL 5 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC005840.2-201ENST00000447193 355 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AL135908.1-202ENST00000454135 562 ntTSL 2 BASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 RN7SL587P-201ENST00000459853 281 ntBASIC8.48□□□□□ -1.05
CDK5RAP1Q96SZ6 AC117392.1-201ENST00000487061 596 ntBASIC8.48□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms