Protein–RNA interactions for Protein: Q6P2Q9

PRPF8, Pre-mRNA-processing-splicing factor 8, humanhuman

Known RBP eCLIP

Length 2,335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8Q6P2Q9 EEF1D-210ENST00000525223 610 ntTSL 311.6□□□□□ -0.551e-26■■□□□ 13
PRPF8Q6P2Q9 CCDC142-205ENST00000472962 645 ntTSL 313.89□□□□□ -0.198e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-221ENST00000532247 1381 ntTSL 1 (best)14.97□□□□□ -0.015e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC14.13□□□□□ -0.155e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC14.13□□□□□ -0.155e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.155e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC13.93□□□□□ -0.185e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.185e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC13.9□□□□□ -0.185e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-209ENST00000525228 566 ntAPPRIS ALT2 TSL 413.88□□□□□ -0.195e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC13.45□□□□□ -0.265e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC13.39□□□□□ -0.275e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC13.29□□□□□ -0.285e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-210ENST00000525377 997 ntAPPRIS ALT2 TSL 513.29□□□□□ -0.285e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC13.27□□□□□ -0.285e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC12.78□□□□□ -0.365e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC12.78□□□□□ -0.365e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.45e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-229ENST00000549213 654 ntAPPRIS ALT2 TSL 3 BASIC9.37□□□□□ -0.915e-8■■□□□ 12.9
PRPF8Q6P2Q9 IL32-225ENST00000548246 447 ntAPPRIS ALT2 TSL 1 (best) BASIC8.71□□□□□ -1.025e-8■■□□□ 12.9
PRPF8Q6P2Q9 U2SURP-213ENST00000491827 824 ntTSL 32.09□□□□□ -2.076e-13■■□□□ 12.9
PRPF8Q6P2Q9 AGRN-203ENST00000461111 3385 ntTSL 1 (best)10.03□□□□□ -0.87e-8■■□□□ 12.9
PRPF8Q6P2Q9 CORO2A-202ENST00000375077 5459 ntAPPRIS P1 TSL 1 (best) BASIC7.95□□□□□ -1.144e-7■■□□□ 12.9
PRPF8Q6P2Q9 CORO2A-201ENST00000343933 5635 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.214e-7■■□□□ 12.9
PRPF8Q6P2Q9 QTRT1-211ENST00000592376 500 ntTSL 39.57□□□□□ -0.883e-17■■□□□ 12.9
PRPF8Q6P2Q9 THRAP3-204ENST00000478853 380 ntAPPRIS ALT2 TSL 214.82□□□□□ -0.044e-9■■□□□ 12.9
PRPF8Q6P2Q9 GNA11-203ENST00000586763 354 ntTSL 313.72□□□□□ -0.213e-6■■□□□ 12.9
PRPF8Q6P2Q9 CAMKK2-210ENST00000535524 809 ntTSL 218.55■□□□□ 0.562e-7■■□□□ 12.9
PRPF8Q6P2Q9 SSR3-205ENST00000467789 1039 ntTSL 2 BASIC8.93□□□□□ -0.989e-7■■□□□ 12.9
PRPF8Q6P2Q9 SSR3-201ENST00000265044 3716 ntAPPRIS P1 TSL 1 (best) BASIC7.91□□□□□ -1.149e-7■■□□□ 12.9
PRPF8Q6P2Q9 SSR3-206ENST00000476217 807 ntTSL 3 BASIC3.99□□□□□ -1.779e-7■■□□□ 12.9
PRPF8Q6P2Q9 SSR3-204ENST00000467733 873 ntTSL 23.92□□□□□ -1.789e-7■■□□□ 12.9
PRPF8Q6P2Q9 FST-202ENST00000396947 2538 ntTSL 5 BASIC13.89□□□□□ -0.197e-8■■□□□ 12.9
PRPF8Q6P2Q9 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.327e-8■■□□□ 12.9
PRPF8Q6P2Q9 PHYKPL-203ENST00000393488 1001 ntTSL 312.11□□□□□ -0.471e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-224ENST00000625172 2297 ntTSL 4 BASIC11.46□□□□□ -0.585e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-222ENST00000557021 2258 ntTSL 5 BASIC11.22□□□□□ -0.615e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-203ENST00000371674 2133 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.895e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-217ENST00000486653 563 ntTSL 48.33□□□□□ -1.085e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-206ENST00000415862 2387 ntTSL 1 (best) BASIC8.19□□□□□ -1.15e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-223ENST00000617119 2432 ntTSL 4 BASIC6.46□□□□□ -1.375e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-205ENST00000396059 1983 ntTSL 1 (best)6.3□□□□□ -1.45e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-202ENST00000371657 1973 ntTSL 4 BASIC6.22□□□□□ -1.415e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-211ENST00000467839 566 ntTSL 26.03□□□□□ -1.445e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-204ENST00000371677 2459 ntTSL 2 BASIC5.82□□□□□ -1.485e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-201ENST00000340309 2536 ntTSL 1 (best) BASIC5.3□□□□□ -1.565e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-219ENST00000490555 549 ntTSL 44.62□□□□□ -1.675e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-221ENST00000493090 563 ntTSL 44.17□□□□□ -1.745e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-214ENST00000472923 421 ntTSL 52.49□□□□□ -2.015e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-216ENST00000483534 1155 ntTSL 1 (best)2.49□□□□□ -2.015e-8■■□□□ 12.9
PRPF8Q6P2Q9 UBE2V1-220ENST00000492371 535 ntTSL 3-0.43□□□□□ -2.485e-8■■□□□ 12.9
PRPF8Q6P2Q9 MGRN1-207ENST00000587145 577 ntTSL 49.58□□□□□ -0.882e-7■■□□□ 12.9
PRPF8Q6P2Q9 MGRN1-212ENST00000590457 552 ntTSL 39.58□□□□□ -0.882e-7■■□□□ 12.9
PRPF8Q6P2Q9 GTF2H1-206ENST00000526282 558 ntTSL 35.19□□□□□ -1.582e-6■■□□□ 12.9
PRPF8Q6P2Q9 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.1□□□□□ -1.592e-6■■□□□ 12.9
PRPF8Q6P2Q9 GTF2H1-209ENST00000528427 580 ntTSL 34.42□□□□□ -1.72e-6■■□□□ 12.9
PRPF8Q6P2Q9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.895e-8■■□□□ 12.9
PRPF8Q6P2Q9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC19.22■□□□□ 0.675e-8■■□□□ 12.9
PRPF8Q6P2Q9 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC18.64■□□□□ 0.585e-8■■□□□ 12.9
PRPF8Q6P2Q9 PHF23-204ENST00000570899 649 ntTSL 313.65□□□□□ -0.225e-8■■□□□ 12.9
PRPF8Q6P2Q9 PHF23-213ENST00000613632 850 ntTSL 5 BASIC11.36□□□□□ -0.595e-8■■□□□ 12.9
PRPF8Q6P2Q9 ERMAP-201ENST00000328249 3949 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.272e-6■■□□□ 12.9
PRPF8Q6P2Q9 ERMAP-202ENST00000372514 3369 ntAPPRIS P2 TSL 1 (best) BASIC6.99□□□□□ -1.292e-6■■□□□ 12.9
PRPF8Q6P2Q9 ERMAP-205ENST00000487556 2988 ntTSL 56.97□□□□□ -1.292e-6■■□□□ 12.9
PRPF8Q6P2Q9 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.32e-6■■□□□ 12.9
PRPF8Q6P2Q9 IPO7-206ENST00000533233 578 ntTSL 411.78□□□□□ -0.522e-6■■□□□ 12.9
PRPF8Q6P2Q9 GCN1-209ENST00000551920 558 ntTSL 313.69□□□□□ -0.221e-10■■□□□ 12.9
PRPF8Q6P2Q9 CALCOCO1-217ENST00000549935 2112 ntTSL 59.45□□□□□ -0.94e-6■■□□□ 12.9
PRPF8Q6P2Q9 MCRIP2-202ENST00000474840 702 ntTSL 1 (best)22.65■■□□□ 1.224e-15■■□□□ 12.9
PRPF8Q6P2Q9 MCRIP2-203ENST00000491999 1050 ntTSL 519.01■□□□□ 0.634e-15■■□□□ 12.9
PRPF8Q6P2Q9 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.014e-15■■□□□ 12.9
PRPF8Q6P2Q9 MCRIP2-205ENST00000611328 628 ntTSL 312.89□□□□□ -0.354e-15■■□□□ 12.9
PRPF8Q6P2Q9 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC18.12■□□□□ 0.493e-6■■□□□ 12.9
PRPF8Q6P2Q9 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.11■□□□□ 0.333e-6■■□□□ 12.9
PRPF8Q6P2Q9 RELL2-204ENST00000518025 2461 ntTSL 1 (best)14.92□□□□□ -0.023e-6■■□□□ 12.9
PRPF8Q6P2Q9 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.123e-6■■□□□ 12.9
PRPF8Q6P2Q9 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.173e-6■■□□□ 12.9
PRPF8Q6P2Q9 RELL2-203ENST00000517794 844 ntTSL 313.96□□□□□ -0.173e-6■■□□□ 12.9
PRPF8Q6P2Q9 RELL2-206ENST00000520674 2329 ntTSL 213.41□□□□□ -0.263e-6■■□□□ 12.9
PRPF8Q6P2Q9 CDIP1-212ENST00000588381 484 ntTSL 315.06■□□□□ 01e-7■■□□□ 12.9
PRPF8Q6P2Q9 CDIP1-204ENST00000563186 444 ntTSL 511.54□□□□□ -0.561e-7■■□□□ 12.9
PRPF8Q6P2Q9 CDIP1-210ENST00000586728 756 ntTSL 59.35□□□□□ -0.911e-7■■□□□ 12.9
PRPF8Q6P2Q9 AFF1-203ENST00000503369 598 ntTSL 25.32□□□□□ -1.564e-9■■□□□ 12.9
PRPF8Q6P2Q9 BANP-209ENST00000439677 736 ntTSL 514.07□□□□□ -0.167e-6■■□□□ 12.9
PRPF8Q6P2Q9 CD99-208ENST00000482405 842 ntTSL 217.59■□□□□ 0.416e-7■■□□□ 12.9
PRPF8Q6P2Q9 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC17.59■□□□□ 0.416e-7■■□□□ 12.9
PRPF8Q6P2Q9 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.366e-7■■□□□ 12.9
PRPF8Q6P2Q9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.336e-7■■□□□ 12.9
PRPF8Q6P2Q9 CD99-207ENST00000482293 466 ntTSL 216.74■□□□□ 0.276e-7■■□□□ 12.9
PRPF8Q6P2Q9 CD99-206ENST00000449611 604 ntAPPRIS ALT2 TSL 515.65■□□□□ 0.16e-7■■□□□ 12.9
PRPF8Q6P2Q9 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.036e-7■■□□□ 12.9
PRPF8Q6P2Q9 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.126e-7■■□□□ 12.9
PRPF8Q6P2Q9 CD99-211ENST00000623253 573 ntTSL 1 (best)14.09□□□□□ -0.156e-7■■□□□ 12.9
PRPF8Q6P2Q9 C14orf159-207ENST00000517518 1597 ntTSL 1 (best)8.79□□□□□ -17e-6■■□□□ 12.9
PRPF8Q6P2Q9 ANPEP-208ENST00000560030 896 ntTSL 512.95□□□□□ -0.343e-7■■□□□ 12.9
PRPF8Q6P2Q9 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC11.72□□□□□ -0.533e-8■■□□□ 12.9
PRPF8Q6P2Q9 WDR83OS-203ENST00000598732 627 ntTSL 29.75□□□□□ -0.853e-8■■□□□ 12.9
PRPF8Q6P2Q9 WDR83OS-201ENST00000222190 599 ntAPPRIS ALT1 TSL 2 BASIC9.15□□□□□ -0.953e-8■■□□□ 12.9
PRPF8Q6P2Q9 NDUFS2-215ENST00000496553 888 ntTSL 218.09■□□□□ 0.492e-9■■□□□ 12.9
PRPF8Q6P2Q9 NDUFS2-214ENST00000496133 815 ntTSL 517.94■□□□□ 0.462e-9■■□□□ 12.9
Retrieved 100 of 73,762 protein–RNA pairs in 745.3 ms