RNA–Protein interactions for RNA: ENST00000503369.1

AFF1-203, Transcript of AF4/FMR2 family member 1, humanhuman

TSL 2

Gene AFF1, Length 598 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF1-203ENST00000503369 AEBP2Q6ZN18 517 aaPredicted RBP27.34■■□□□ 1.97
AFF1-203ENST00000503369 CHIC1Q5VXU3 224 aa25.37■■□□□ 1.65
AFF1-203ENST00000503369 SENP3Q9H4L4 574 aaPredicted RBP23.26■■□□□ 1.31
AFF1-203ENST00000503369 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
AFF1-203ENST00000503369 FOXD1Q16676 465 aa21.84■■□□□ 1.09
AFF1-203ENST00000503369 POTEDQ86YR6 584 aa21.09■□□□□ 0.97
AFF1-203ENST00000503369 MSH5O43196 834 aa20.54■□□□□ 0.88
AFF1-203ENST00000503369 PIAS4Q8N2W9 510 aaPredicted RBP20.19■□□□□ 0.82
AFF1-203ENST00000503369 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
AFF1-203ENST00000503369 PLPPR3Q6T4P5 718 aa19.93■□□□□ 0.78
AFF1-203ENST00000503369 ADRA2BP18089 450 aa19.91■□□□□ 0.78
AFF1-203ENST00000503369 MAPK8IP2Q13387 824 aaPredicted RBP18.48■□□□□ 0.55
AFF1-203ENST00000503369 DMRT2Q9Y5R5 561 aa18.4■□□□□ 0.54
AFF1-203ENST00000503369 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
AFF1-203ENST00000503369 CACNB1Q02641 598 aaPredicted RBP17.97■□□□□ 0.47
AFF1-203ENST00000503369 DCAF8L1A6NGE4 600 aa17.58■□□□□ 0.4
AFF1-203ENST00000503369 RNF39Q9H2S5 420 aa17.56■□□□□ 0.4
AFF1-203ENST00000503369 HOXD11P31277 338 aaPredicted RBP17.53■□□□□ 0.4
AFF1-203ENST00000503369 PPP4R3CPQ6ZMV5 832 aa17.44■□□□□ 0.38
AFF1-203ENST00000503369 C1QBPQ07021 282 aaKnown RBP17.21■□□□□ 0.35
AFF1-203ENST00000503369 CNKSR2Q8WXI2 1034 aa17.21■□□□□ 0.35
AFF1-203ENST00000503369 RNF216Q9NWF9 866 aaPredicted RBP17.21■□□□□ 0.35
AFF1-203ENST00000503369 DNAJC5BQ9UF47 199 aa17.01■□□□□ 0.31
AFF1-203ENST00000503369 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.61■□□□□ 0.252e-7■■□□□ 14.1
AFF1-203ENST00000503369 NCBP3Q53F19 620 aaKnown RBP16.51■□□□□ 0.23
AFF1-203ENST00000503369 NPM3O75607 178 aaKnown RBP16.38■□□□□ 0.21
AFF1-203ENST00000503369 POTEHQ6S545 545 aa16.38■□□□□ 0.21
AFF1-203ENST00000503369 U3KPZ7 1027 aaPredicted RBP16.29■□□□□ 0.2
AFF1-203ENST00000503369 DSG3P32926 999 aa16.25■□□□□ 0.19
AFF1-203ENST00000503369 SPINK5Q9NQ38 1064 aaPredicted RBP16.23■□□□□ 0.19
AFF1-203ENST00000503369 CAPN15O75808 1086 aa16.13■□□□□ 0.17
AFF1-203ENST00000503369 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
AFF1-203ENST00000503369 ABCB7O75027 752 aa15.75■□□□□ 0.11
AFF1-203ENST00000503369 TRHP20396 242 aaPredicted RBP15.75■□□□□ 0.11
AFF1-203ENST00000503369 ZNF219Q9P2Y4 722 aaPredicted RBP15.67■□□□□ 0.1
AFF1-203ENST00000503369 KCNA4P22459 653 aa15.6■□□□□ 0.09
AFF1-203ENST00000503369 APLP2Q06481 763 aa15.59■□□□□ 0.09
AFF1-203ENST00000503369 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.49■□□□□ 0.07
AFF1-203ENST00000503369 HNRNPUL2Q1KMD3 747 aaKnown RBP15.49■□□□□ 0.07
AFF1-203ENST00000503369 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
AFF1-203ENST00000503369 RBM42Q9BTD8 480 aaKnown RBP15.4■□□□□ 0.06
AFF1-203ENST00000503369 CHRDL2Q6WN34 429 aa15.36■□□□□ 0.05
AFF1-203ENST00000503369 POLA2Q14181 598 aa15.24■□□□□ 0.03
AFF1-203ENST00000503369 MYCNP04198 464 aaPredicted RBP15.09■□□□□ 0.01
AFF1-203ENST00000503369 SP7Q8TDD2 431 aaPredicted RBP15.08■□□□□ 0
AFF1-203ENST00000503369 AKT1S1Q96B36 256 aa14.99□□□□□ -0.01
AFF1-203ENST00000503369 ATF5Q9Y2D1 282 aaPredicted RBP14.92□□□□□ -0.02
AFF1-203ENST00000503369 PIP4P2Q8N4L2 257 aa14.91□□□□□ -0.02
AFF1-203ENST00000503369 REM2Q8IYK8 340 aaPredicted RBP14.89□□□□□ -0.03
AFF1-203ENST00000503369 ZBTB12Q9Y330 459 aaPredicted RBP14.79□□□□□ -0.04
AFF1-203ENST00000503369 OSCARQ8IYS5 282 aa14.77□□□□□ -0.05
AFF1-203ENST00000503369 PITPNM1O00562 1244 aa14.74□□□□□ -0.05
AFF1-203ENST00000503369 FXR2P51116 673 aaKnown RBP eCLIP14.74□□□□□ -0.054e-8■■■□□ 18.1
AFF1-203ENST00000503369 HAX1O00165 279 aa14.72□□□□□ -0.05
AFF1-203ENST00000503369 EVX2Q03828 476 aa14.65□□□□□ -0.06
AFF1-203ENST00000503369 FOXD4L1Q9NU39 408 aa14.65□□□□□ -0.06
AFF1-203ENST00000503369 NISCHQ9Y2I1 1504 aa14.55□□□□□ -0.08
AFF1-203ENST00000503369 SLC4A1APQ9BWU0 796 aaKnown RBP14.54□□□□□ -0.08
AFF1-203ENST00000503369 ZBTB22O15209 634 aa14.39□□□□□ -0.11
AFF1-203ENST00000503369 SPDYE2BA6NHP3 402 aa14.35□□□□□ -0.11
AFF1-203ENST00000503369 SPDYE6P0CI01 402 aa14.35□□□□□ -0.11
AFF1-203ENST00000503369 SPDYE2Q495Y8 402 aa14.35□□□□□ -0.11
AFF1-203ENST00000503369 PRKAR2AP13861 404 aaKnown RBP14.32□□□□□ -0.12
AFF1-203ENST00000503369 C19orf67A6NJJ6 358 aa14.28□□□□□ -0.12
AFF1-203ENST00000503369 ATXN8OSP0DMR3 200 aa14.26□□□□□ -0.13
AFF1-203ENST00000503369 SPDYE1Q8NFV5 336 aaPredicted RBP14.21□□□□□ -0.13
AFF1-203ENST00000503369 CLEC11AQ9Y240 323 aa14.21□□□□□ -0.13
AFF1-203ENST00000503369 GABBR2O75899 941 aa14.2□□□□□ -0.14
AFF1-203ENST00000503369 FBLN2P98095 1184 aa14.2□□□□□ -0.14
AFF1-203ENST00000503369 MKRN4PQ13434 485 aaPredicted RBP14.2□□□□□ -0.14
AFF1-203ENST00000503369 SSUH2Q9Y2M2 353 aa14.16□□□□□ -0.14
AFF1-203ENST00000503369 LHX8Q68G74 356 aa14.14□□□□□ -0.15
AFF1-203ENST00000503369 ZNF692Q9BU19 519 aaPredicted RBP14.08□□□□□ -0.16
AFF1-203ENST00000503369 CHADLQ6NUI6 762 aa14.07□□□□□ -0.16
AFF1-203ENST00000503369 POTEIP0CG38 1075 aa13.97□□□□□ -0.17
AFF1-203ENST00000503369 PRR29P0C7W0 189 aa13.9□□□□□ -0.18
AFF1-203ENST00000503369 PABPN1Q86U42 306 aaKnown RBP eCLIP13.88□□□□□ -0.19
AFF1-203ENST00000503369 CD44P16070 742 aaKnown RBP13.82□□□□□ -0.2
AFF1-203ENST00000503369 FARP1Q9Y4F1 1045 aaPredicted RBP13.79□□□□□ -0.2
AFF1-203ENST00000503369 CLCN6P51797 869 aa13.69□□□□□ -0.22
AFF1-203ENST00000503369 PLSCR2Q9NRY7 297 aa13.64□□□□□ -0.23
AFF1-203ENST00000503369 ZNF579Q8NAF0 562 aaKnown RBP13.61□□□□□ -0.23
AFF1-203ENST00000503369 DCBLD2Q96PD2 775 aa13.61□□□□□ -0.23
AFF1-203ENST00000503369 CCDC180Q9P1Z9 1646 aa13.57□□□□□ -0.24
AFF1-203ENST00000503369 ABCC9O60706 1549 aa13.56□□□□□ -0.24
AFF1-203ENST00000503369 ZRANB1Q9UGI0 708 aa13.54□□□□□ -0.24
AFF1-203ENST00000503369 OTUD5Q96G74 571 aa13.52□□□□□ -0.25
AFF1-203ENST00000503369 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
AFF1-203ENST00000503369 POTEB2H3BUK9 544 aa13.51□□□□□ -0.25
AFF1-203ENST00000503369 GALR2O43603 387 aaPredicted RBP13.51□□□□□ -0.25
AFF1-203ENST00000503369 PELP1Q8IZL8 1130 aaKnown RBP13.35□□□□□ -0.27
AFF1-203ENST00000503369 PHF12Q96QT6 1004 aa13.35□□□□□ -0.27
AFF1-203ENST00000503369 POTEMA6NI47 508 aa13.33□□□□□ -0.28
AFF1-203ENST00000503369 STAG3Q9UJ98 1225 aa13.32□□□□□ -0.28
AFF1-203ENST00000503369 POTEGQ6S5H5 508 aa13.28□□□□□ -0.28
AFF1-203ENST00000503369 MNX1P50219 401 aaPredicted RBP13.27□□□□□ -0.29
AFF1-203ENST00000503369 POTEJP0CG39 1038 aa13.24□□□□□ -0.29
AFF1-203ENST00000503369 PAK3O75914 559 aaPredicted RBP13.21□□□□□ -0.29
AFF1-203ENST00000503369 CSRNP3Q8WYN3 585 aa13.19□□□□□ -0.3
AFF1-203ENST00000503369 ASTLQ6HA08 431 aaPredicted RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.6 ms