RNA–Protein interactions for RNA: ENST00000491827.1

U2SURP-213, Transcript of U2 snRNP associated SURP domain containing, humanhuman

TSL 3

Gene U2SURP, Length 824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2SURP-213ENST00000491827 AEBP2Q6ZN18 517 aaPredicted RBP25.71■■□□□ 1.71
U2SURP-213ENST00000491827 CHIC1Q5VXU3 224 aa24.46■■□□□ 1.51
U2SURP-213ENST00000491827 SENP3Q9H4L4 574 aaPredicted RBP22■■□□□ 1.11
U2SURP-213ENST00000491827 PHF23Q9BUL5 403 aaPredicted RBP21.7■■□□□ 1.06
U2SURP-213ENST00000491827 FOXD1Q16676 465 aa20.47■□□□□ 0.87
U2SURP-213ENST00000491827 PLPPR3Q6T4P5 718 aa19.6■□□□□ 0.73
U2SURP-213ENST00000491827 PIAS4Q8N2W9 510 aaPredicted RBP19.2■□□□□ 0.66
U2SURP-213ENST00000491827 MSH5O43196 834 aa19.18■□□□□ 0.66
U2SURP-213ENST00000491827 ADRA2BP18089 450 aa19.13■□□□□ 0.65
U2SURP-213ENST00000491827 PPP6R1Q9UPN7 881 aa19.13■□□□□ 0.65
U2SURP-213ENST00000491827 POTEDQ86YR6 584 aa18.66■□□□□ 0.58
U2SURP-213ENST00000491827 MAPK8IP2Q13387 824 aaPredicted RBP17.55■□□□□ 0.4
U2SURP-213ENST00000491827 SCAF1Q9H7N4 1312 aaKnown RBP17.54■□□□□ 0.4
U2SURP-213ENST00000491827 DMRT2Q9Y5R5 561 aa17.41■□□□□ 0.38
U2SURP-213ENST00000491827 PPP4R3CPQ6ZMV5 832 aa17.18■□□□□ 0.34
U2SURP-213ENST00000491827 DCAF8L1A6NGE4 600 aa16.86■□□□□ 0.29
U2SURP-213ENST00000491827 CNKSR2Q8WXI2 1034 aa16.85■□□□□ 0.29
U2SURP-213ENST00000491827 HOXD11P31277 338 aaPredicted RBP16.75■□□□□ 0.27
U2SURP-213ENST00000491827 RNF216Q9NWF9 866 aaPredicted RBP16.67■□□□□ 0.26
U2SURP-213ENST00000491827 NCBP3Q53F19 620 aaKnown RBP16.57■□□□□ 0.24
U2SURP-213ENST00000491827 CACNB1Q02641 598 aaPredicted RBP16.5■□□□□ 0.23
U2SURP-213ENST00000491827 RNF39Q9H2S5 420 aa16.33■□□□□ 0.2
U2SURP-213ENST00000491827 NPM3O75607 178 aaKnown RBP16.27■□□□□ 0.2
U2SURP-213ENST00000491827 DNAJC5BQ9UF47 199 aa16.13■□□□□ 0.17
U2SURP-213ENST00000491827 C1QBPQ07021 282 aaKnown RBP16.11■□□□□ 0.17
U2SURP-213ENST00000491827 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.09■□□□□ 0.171e-7■■■□□ 15
U2SURP-213ENST00000491827 KCNA4P22459 653 aa15.99■□□□□ 0.15
U2SURP-213ENST00000491827 U3KPZ7 1027 aaPredicted RBP15.67■□□□□ 0.1
U2SURP-213ENST00000491827 CAPN15O75808 1086 aa15.51■□□□□ 0.07
U2SURP-213ENST00000491827 SLC4A2P04920 1241 aa15.5■□□□□ 0.07
U2SURP-213ENST00000491827 SPINK5Q9NQ38 1064 aaPredicted RBP15.46■□□□□ 0.07
U2SURP-213ENST00000491827 DSG3P32926 999 aa15.31■□□□□ 0.04
U2SURP-213ENST00000491827 APLP2Q06481 763 aa15.31■□□□□ 0.04
U2SURP-213ENST00000491827 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.28■□□□□ 0.04
U2SURP-213ENST00000491827 HNRNPUL2Q1KMD3 747 aaKnown RBP15.28■□□□□ 0.04
U2SURP-213ENST00000491827 TRHP20396 242 aaPredicted RBP15.26■□□□□ 0.03
U2SURP-213ENST00000491827 ZNF219Q9P2Y4 722 aaPredicted RBP15.19■□□□□ 0.02
U2SURP-213ENST00000491827 SAMD1Q6SPF0 538 aaPredicted RBP15.18■□□□□ 0.02
U2SURP-213ENST00000491827 ABCB7O75027 752 aa15.14■□□□□ 0.01
U2SURP-213ENST00000491827 SLC4A1APQ9BWU0 796 aaKnown RBP15.14■□□□□ 0.01
U2SURP-213ENST00000491827 MYCNP04198 464 aaPredicted RBP15.08■□□□□ 0
U2SURP-213ENST00000491827 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
U2SURP-213ENST00000491827 POLA2Q14181 598 aa14.82□□□□□ -0.04
U2SURP-213ENST00000491827 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
U2SURP-213ENST00000491827 ZBTB22O15209 634 aa14.66□□□□□ -0.06
U2SURP-213ENST00000491827 RBM42Q9BTD8 480 aaKnown RBP14.66□□□□□ -0.06
U2SURP-213ENST00000491827 POTEHQ6S545 545 aa14.65□□□□□ -0.06
U2SURP-213ENST00000491827 ZBTB12Q9Y330 459 aaPredicted RBP14.52□□□□□ -0.09
U2SURP-213ENST00000491827 ATXN8OSP0DMR3 200 aa14.44□□□□□ -0.1
U2SURP-213ENST00000491827 OSCARQ8IYS5 282 aa14.34□□□□□ -0.11
U2SURP-213ENST00000491827 CHRDL2Q6WN34 429 aa14.31□□□□□ -0.12
U2SURP-213ENST00000491827 AKT1S1Q96B36 256 aa14.3□□□□□ -0.12
U2SURP-213ENST00000491827 FBLN2P98095 1184 aa14.21□□□□□ -0.13
U2SURP-213ENST00000491827 REM2Q8IYK8 340 aaPredicted RBP14.17□□□□□ -0.14
U2SURP-213ENST00000491827 SPDYE2BA6NHP3 402 aa14.05□□□□□ -0.16
U2SURP-213ENST00000491827 SPDYE6P0CI01 402 aa14.05□□□□□ -0.16
U2SURP-213ENST00000491827 SPDYE2Q495Y8 402 aa14.05□□□□□ -0.16
U2SURP-213ENST00000491827 PITPNM1O00562 1244 aa14.03□□□□□ -0.16
U2SURP-213ENST00000491827 CSRNP3Q8WYN3 585 aa14.02□□□□□ -0.17
U2SURP-213ENST00000491827 MKRN4PQ13434 485 aaPredicted RBP14□□□□□ -0.17
U2SURP-213ENST00000491827 PIP4P2Q8N4L2 257 aa13.97□□□□□ -0.17
U2SURP-213ENST00000491827 EHMT2Q96KQ7 1210 aa13.97□□□□□ -0.17
U2SURP-213ENST00000491827 ZNF692Q9BU19 519 aaPredicted RBP13.93□□□□□ -0.18
U2SURP-213ENST00000491827 FXR2P51116 673 aaKnown RBP eCLIP13.86□□□□□ -0.191e-6■■■■□ 22.8
U2SURP-213ENST00000491827 CLEC11AQ9Y240 323 aa13.86□□□□□ -0.19
U2SURP-213ENST00000491827 SPDYE1Q8NFV5 336 aaPredicted RBP13.82□□□□□ -0.2
U2SURP-213ENST00000491827 SSUH2Q9Y2M2 353 aa13.81□□□□□ -0.2
U2SURP-213ENST00000491827 HAX1O00165 279 aa13.78□□□□□ -0.2
U2SURP-213ENST00000491827 SP7Q8TDD2 431 aaPredicted RBP13.74□□□□□ -0.21
U2SURP-213ENST00000491827 PABPN1Q86U42 306 aaKnown RBP eCLIP13.71□□□□□ -0.21
U2SURP-213ENST00000491827 PRKAR2AP13861 404 aaKnown RBP13.69□□□□□ -0.22
U2SURP-213ENST00000491827 PRR29P0C7W0 189 aa13.6□□□□□ -0.23
U2SURP-213ENST00000491827 CHADLQ6NUI6 762 aa13.55□□□□□ -0.24
U2SURP-213ENST00000491827 EVX2Q03828 476 aa13.51□□□□□ -0.25
U2SURP-213ENST00000491827 C19orf67A6NJJ6 358 aa13.42□□□□□ -0.26
U2SURP-213ENST00000491827 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
U2SURP-213ENST00000491827 STAG3Q9UJ98 1225 aa13.34□□□□□ -0.27
U2SURP-213ENST00000491827 FARP1Q9Y4F1 1045 aaPredicted RBP13.32□□□□□ -0.28
U2SURP-213ENST00000491827 CD44P16070 742 aaKnown RBP13.26□□□□□ -0.29
U2SURP-213ENST00000491827 GABBR2O75899 941 aa13.24□□□□□ -0.29
U2SURP-213ENST00000491827 CREBZFQ9NS37 354 aa13.2□□□□□ -0.3
U2SURP-213ENST00000491827 ZRANB1Q9UGI0 708 aa13.09□□□□□ -0.31
U2SURP-213ENST00000491827 PAK3O75914 559 aaPredicted RBP13.03□□□□□ -0.32
U2SURP-213ENST00000491827 NPM1P06748 294 aaKnown RBP eCLIP13.03□□□□□ -0.32
U2SURP-213ENST00000491827 CLCN6P51797 869 aa13.03□□□□□ -0.32
U2SURP-213ENST00000491827 ZNF579Q8NAF0 562 aaKnown RBP13□□□□□ -0.33
U2SURP-213ENST00000491827 PROM2Q8N271 834 aa12.98□□□□□ -0.33
U2SURP-213ENST00000491827 DCBLD2Q96PD2 775 aa12.96□□□□□ -0.33
U2SURP-213ENST00000491827 MNX1P50219 401 aaPredicted RBP12.93□□□□□ -0.34
U2SURP-213ENST00000491827 POTEIP0CG38 1075 aa12.91□□□□□ -0.34
U2SURP-213ENST00000491827 LHX8Q68G74 356 aa12.91□□□□□ -0.34
U2SURP-213ENST00000491827 PHF12Q96QT6 1004 aa12.89□□□□□ -0.35
U2SURP-213ENST00000491827 PLEKHG5O94827 1062 aa12.88□□□□□ -0.35
U2SURP-213ENST00000491827 GALR2O43603 387 aaPredicted RBP12.87□□□□□ -0.35
U2SURP-213ENST00000491827 MIER1Q8N108 512 aa12.85□□□□□ -0.35
U2SURP-213ENST00000491827 TSPYL2Q9H2G4 693 aaPredicted RBP12.81□□□□□ -0.36
U2SURP-213ENST00000491827 FKBP8Q14318 412 aa12.8□□□□□ -0.36
U2SURP-213ENST00000491827 PLCD3Q8N3E9 789 aa12.77□□□□□ -0.37
U2SURP-213ENST00000491827 MS4A3Q96HJ5 214 aa12.7□□□□□ -0.38
U2SURP-213ENST00000491827 CCDC61Q9Y6R9 512 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms