RNA–Protein interactions for RNA: ENST00000528427.1

GTF2H1-209, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 580 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-209ENST00000528427 AEBP2Q6ZN18 517 aaPredicted RBP29.73■■■□□ 2.35
GTF2H1-209ENST00000528427 CHIC1Q5VXU3 224 aa28.46■■■□□ 2.15
GTF2H1-209ENST00000528427 SENP3Q9H4L4 574 aaPredicted RBP25.23■■□□□ 1.63
GTF2H1-209ENST00000528427 PHF23Q9BUL5 403 aaPredicted RBP25.01■■□□□ 1.59
GTF2H1-209ENST00000528427 FOXD1Q16676 465 aa23.53■■□□□ 1.36
GTF2H1-209ENST00000528427 PLPPR3Q6T4P5 718 aa22.82■■□□□ 1.24
GTF2H1-209ENST00000528427 PPP6R1Q9UPN7 881 aa22.24■■□□□ 1.15
GTF2H1-209ENST00000528427 ADRA2BP18089 450 aa22.16■■□□□ 1.14
GTF2H1-209ENST00000528427 PIAS4Q8N2W9 510 aaPredicted RBP22■■□□□ 1.11
GTF2H1-209ENST00000528427 MSH5O43196 834 aa21.85■■□□□ 1.09
GTF2H1-209ENST00000528427 POTEDQ86YR6 584 aa20.91■□□□□ 0.94
GTF2H1-209ENST00000528427 MAPK8IP2Q13387 824 aaPredicted RBP20.28■□□□□ 0.84
GTF2H1-209ENST00000528427 SCAF1Q9H7N4 1312 aaKnown RBP20.19■□□□□ 0.82
GTF2H1-209ENST00000528427 DMRT2Q9Y5R5 561 aa20.09■□□□□ 0.81
GTF2H1-209ENST00000528427 PPP4R3CPQ6ZMV5 832 aa20.06■□□□□ 0.8
GTF2H1-209ENST00000528427 CNKSR2Q8WXI2 1034 aa19.6■□□□□ 0.73
GTF2H1-209ENST00000528427 HOXD11P31277 338 aaPredicted RBP19.47■□□□□ 0.71
GTF2H1-209ENST00000528427 RNF216Q9NWF9 866 aaPredicted RBP19.37■□□□□ 0.69
GTF2H1-209ENST00000528427 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
GTF2H1-209ENST00000528427 DCAF8L1A6NGE4 600 aa19.15■□□□□ 0.66
GTF2H1-209ENST00000528427 NPM3O75607 178 aaKnown RBP19.11■□□□□ 0.65
GTF2H1-209ENST00000528427 KCNA4P22459 653 aa18.99■□□□□ 0.63
GTF2H1-209ENST00000528427 DNAJC5BQ9UF47 199 aa18.73■□□□□ 0.59
GTF2H1-209ENST00000528427 RNF39Q9H2S5 420 aa18.72■□□□□ 0.59
GTF2H1-209ENST00000528427 CACNB1Q02641 598 aaPredicted RBP18.57■□□□□ 0.56
GTF2H1-209ENST00000528427 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.47■□□□□ 0.55
GTF2H1-209ENST00000528427 C1QBPQ07021 282 aaKnown RBP18.42■□□□□ 0.54
GTF2H1-209ENST00000528427 SLC4A2P04920 1241 aa18.21■□□□□ 0.51
GTF2H1-209ENST00000528427 U3KPZ7 1027 aaPredicted RBP18.19■□□□□ 0.5
GTF2H1-209ENST00000528427 SLC4A1APQ9BWU0 796 aaKnown RBP17.94■□□□□ 0.46
GTF2H1-209ENST00000528427 SPINK5Q9NQ38 1064 aaPredicted RBP17.84■□□□□ 0.45
GTF2H1-209ENST00000528427 CAPN15O75808 1086 aa17.73■□□□□ 0.43
GTF2H1-209ENST00000528427 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.68■□□□□ 0.42
GTF2H1-209ENST00000528427 HNRNPUL2Q1KMD3 747 aaKnown RBP17.68■□□□□ 0.42
GTF2H1-209ENST00000528427 MYCNP04198 464 aaPredicted RBP17.63■□□□□ 0.41
GTF2H1-209ENST00000528427 DSG3P32926 999 aa17.63■□□□□ 0.41
GTF2H1-209ENST00000528427 SAMD1Q6SPF0 538 aaPredicted RBP17.61■□□□□ 0.41
GTF2H1-209ENST00000528427 FOXD4L1Q9NU39 408 aa17.61■□□□□ 0.41
GTF2H1-209ENST00000528427 APLP2Q06481 763 aa17.6■□□□□ 0.41
GTF2H1-209ENST00000528427 ZBTB22O15209 634 aa17.52■□□□□ 0.4
GTF2H1-209ENST00000528427 TRHP20396 242 aaPredicted RBP17.51■□□□□ 0.39
GTF2H1-209ENST00000528427 ZNF219Q9P2Y4 722 aaPredicted RBP17.49■□□□□ 0.39
GTF2H1-209ENST00000528427 ABCB7O75027 752 aa17.37■□□□□ 0.37
GTF2H1-209ENST00000528427 ATF5Q9Y2D1 282 aaPredicted RBP17.27■□□□□ 0.36
GTF2H1-209ENST00000528427 POLA2Q14181 598 aa17.13■□□□□ 0.33
GTF2H1-209ENST00000528427 ATXN8OSP0DMR3 200 aa17.04■□□□□ 0.32
GTF2H1-209ENST00000528427 CSRNP3Q8WYN3 585 aa16.93■□□□□ 0.3
GTF2H1-209ENST00000528427 EHMT2Q96KQ7 1210 aa16.79■□□□□ 0.28
GTF2H1-209ENST00000528427 ZBTB12Q9Y330 459 aaPredicted RBP16.77■□□□□ 0.28
GTF2H1-209ENST00000528427 RBM42Q9BTD8 480 aaKnown RBP16.74■□□□□ 0.27
GTF2H1-209ENST00000528427 OSCARQ8IYS5 282 aa16.59■□□□□ 0.25
GTF2H1-209ENST00000528427 MKRN4PQ13434 485 aaPredicted RBP16.5■□□□□ 0.23
GTF2H1-209ENST00000528427 FBLN2P98095 1184 aa16.47■□□□□ 0.23
GTF2H1-209ENST00000528427 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
GTF2H1-209ENST00000528427 POTEHQ6S545 545 aa16.42■□□□□ 0.22
GTF2H1-209ENST00000528427 REM2Q8IYK8 340 aaPredicted RBP16.31■□□□□ 0.2
GTF2H1-209ENST00000528427 SPDYE2BA6NHP3 402 aa16.3■□□□□ 0.2
GTF2H1-209ENST00000528427 SPDYE6P0CI01 402 aa16.3■□□□□ 0.2
GTF2H1-209ENST00000528427 SPDYE2Q495Y8 402 aa16.3■□□□□ 0.2
GTF2H1-209ENST00000528427 CHRDL2Q6WN34 429 aa16.3■□□□□ 0.2
GTF2H1-209ENST00000528427 SSUH2Q9Y2M2 353 aa16.16■□□□□ 0.18
GTF2H1-209ENST00000528427 PITPNM1O00562 1244 aa16.14■□□□□ 0.17
GTF2H1-209ENST00000528427 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
GTF2H1-209ENST00000528427 PIP4P2Q8N4L2 257 aa16■□□□□ 0.15
GTF2H1-209ENST00000528427 FXR2P51116 673 aaKnown RBP eCLIP15.96■□□□□ 0.15
GTF2H1-209ENST00000528427 PABPN1Q86U42 306 aaKnown RBP eCLIP15.93■□□□□ 0.14
GTF2H1-209ENST00000528427 SPDYE1Q8NFV5 336 aaPredicted RBP15.93■□□□□ 0.14
GTF2H1-209ENST00000528427 CLEC11AQ9Y240 323 aa15.87■□□□□ 0.13
GTF2H1-209ENST00000528427 SPDYE4A6NLX3 237 aa15.79■□□□□ 0.12
GTF2H1-209ENST00000528427 PRKAR2AP13861 404 aaKnown RBP15.7■□□□□ 0.1
GTF2H1-209ENST00000528427 PRR29P0C7W0 189 aa15.66■□□□□ 0.1
GTF2H1-209ENST00000528427 CHADLQ6NUI6 762 aa15.59■□□□□ 0.09
GTF2H1-209ENST00000528427 HAX1O00165 279 aa15.57■□□□□ 0.08
GTF2H1-209ENST00000528427 PROM2Q8N271 834 aa15.53■□□□□ 0.08
GTF2H1-209ENST00000528427 SP7Q8TDD2 431 aaPredicted RBP15.52■□□□□ 0.08
GTF2H1-209ENST00000528427 STAG3Q9UJ98 1225 aa15.51■□□□□ 0.07
GTF2H1-209ENST00000528427 EVX2Q03828 476 aa15.5■□□□□ 0.07
GTF2H1-209ENST00000528427 C19orf67A6NJJ6 358 aa15.44■□□□□ 0.06
GTF2H1-209ENST00000528427 CREBZFQ9NS37 354 aa15.41■□□□□ 0.06
GTF2H1-209ENST00000528427 FARP1Q9Y4F1 1045 aaPredicted RBP15.39■□□□□ 0.05
GTF2H1-209ENST00000528427 FKBP8Q14318 412 aa15.28■□□□□ 0.04
GTF2H1-209ENST00000528427 CD44P16070 742 aaKnown RBP15.21■□□□□ 0.03
GTF2H1-209ENST00000528427 MNX1P50219 401 aaPredicted RBP15.21■□□□□ 0.03
GTF2H1-209ENST00000528427 GABBR2O75899 941 aa15.12■□□□□ 0.01
GTF2H1-209ENST00000528427 NPM1P06748 294 aaKnown RBP eCLIP15.05■□□□□ -0
GTF2H1-209ENST00000528427 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
GTF2H1-209ENST00000528427 ZNF579Q8NAF0 562 aaKnown RBP15.02■□□□□ -0
GTF2H1-209ENST00000528427 MIER1Q8N108 512 aa14.99□□□□□ -0.01
GTF2H1-209ENST00000528427 CLCN6P51797 869 aa14.93□□□□□ -0.02
GTF2H1-209ENST00000528427 PAK3O75914 559 aaPredicted RBP14.91□□□□□ -0.02
GTF2H1-209ENST00000528427 PLEKHG5O94827 1062 aa14.9□□□□□ -0.02
GTF2H1-209ENST00000528427 PLCD3Q8N3E9 789 aa14.9□□□□□ -0.02
GTF2H1-209ENST00000528427 PHF12Q96QT6 1004 aa14.88□□□□□ -0.03
GTF2H1-209ENST00000528427 POTEIP0CG38 1075 aa14.85□□□□□ -0.03
GTF2H1-209ENST00000528427 FBXO3Q9UK99 471 aa14.84□□□□□ -0.03
GTF2H1-209ENST00000528427 GALR2O43603 387 aaPredicted RBP14.82□□□□□ -0.04
GTF2H1-209ENST00000528427 RASEFQ8IZ41 740 aa14.81□□□□□ -0.04
GTF2H1-209ENST00000528427 TSPYL2Q9H2G4 693 aaPredicted RBP14.81□□□□□ -0.04
GTF2H1-209ENST00000528427 CCDC61Q9Y6R9 512 aa14.79□□□□□ -0.04
GTF2H1-209ENST00000528427 ZBTB47Q9UFB7 747 aaPredicted RBP14.76□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms