Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 FHL1-217ENST00000539015 2310 ntTSL 2 BASIC8.52□□□□□ -1.05
SLC1A1P43005 AC002540.1-201ENST00000625023 1349 ntBASIC8.52□□□□□ -1.05
SLC1A1P43005 RYBP-201ENST00000477973 7215 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 GIMAP8-201ENST00000307271 4184 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 FAM118B-201ENST00000360194 1616 ntAPPRIS ALT1 TSL 5 BASIC8.51□□□□□ -1.05
SLC1A1P43005 LINC00662-203ENST00000586954 2254 ntTSL 2 BASIC8.51□□□□□ -1.05
SLC1A1P43005 EEF1A1P11-201ENST00000415278 1389 ntBASIC8.51□□□□□ -1.05
SLC1A1P43005 TMEM217-201ENST00000336655 1546 ntAPPRIS P3 TSL 2 BASIC8.51□□□□□ -1.05
SLC1A1P43005 MYOCD-203ENST00000425538 8466 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 ZNF24-204ENST00000589881 7419 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 CSAG4-201ENST00000361201 755 ntTSL 2 BASIC8.51□□□□□ -1.05
SLC1A1P43005 RN7SKP37-201ENST00000364494 296 ntBASIC8.51□□□□□ -1.05
SLC1A1P43005 AP001042.1-201ENST00000416842 487 ntTSL 3 BASIC8.51□□□□□ -1.05
SLC1A1P43005 FKBP1AP3-201ENST00000423650 319 ntBASIC8.51□□□□□ -1.05
SLC1A1P43005 LINC02021-203ENST00000514145 569 ntTSL 4 BASIC8.51□□□□□ -1.05
SLC1A1P43005 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC8.51□□□□□ -1.05
SLC1A1P43005 ZFAND1-214ENST00000521287 772 ntTSL 3 BASIC8.51□□□□□ -1.05
SLC1A1P43005 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 NTAN1P3-201ENST00000535885 715 ntBASIC8.51□□□□□ -1.05
SLC1A1P43005 AC087894.2-201ENST00000541797 462 ntTSL 4 BASIC8.51□□□□□ -1.05
SLC1A1P43005 NOVA1-AS1-201ENST00000547786 818 ntTSL 3 BASIC8.51□□□□□ -1.05
SLC1A1P43005 CSAG4-202ENST00000583763 237 ntBASIC8.51□□□□□ -1.05
SLC1A1P43005 SRP68P1-201ENST00000584247 269 ntBASIC8.51□□□□□ -1.05
SLC1A1P43005 AC005580.1-202ENST00000587140 562 ntTSL 5 BASIC8.51□□□□□ -1.05
SLC1A1P43005 RPS11-202ENST00000594493 575 ntTSL 3 BASIC8.51□□□□□ -1.05
SLC1A1P43005 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC8.51□□□□□ -1.05
SLC1A1P43005 AL627309.1-205ENST00000610542 723 ntTSL 5 BASIC8.51□□□□□ -1.05
SLC1A1P43005 LYG2-206ENST00000626374 650 ntTSL 5 BASIC8.51□□□□□ -1.05
SLC1A1P43005 AC084879.1-201ENST00000636165 1201 ntBASIC8.51□□□□□ -1.05
SLC1A1P43005 AC114324.1-201ENST00000504077 3152 ntBASIC8.51□□□□□ -1.05
SLC1A1P43005 LINC00559-201ENST00000569476 3867 ntTSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 BTN2A1-201ENST00000312541 2920 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 MGC27382-202ENST00000436742 1993 ntTSL 2 BASIC8.51□□□□□ -1.05
SLC1A1P43005 PTPRB-209ENST00000550857 5839 ntAPPRIS ALT2 TSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 LINC02208-201ENST00000506769 2803 ntTSL 5 BASIC8.51□□□□□ -1.05
SLC1A1P43005 SLC8A1-203ENST00000403092 3178 ntAPPRIS P1 TSL 1 (best) BASIC8.51□□□□□ -1.05
SLC1A1P43005 PACRG-201ENST00000337019 1619 ntTSL 2 BASIC8.51□□□□□ -1.05
SLC1A1P43005 GOLGA6L1-201ENST00000614055 2620 ntAPPRIS P1 TSL 5 BASIC8.5□□□□□ -1.05
SLC1A1P43005 GLI1-201ENST00000228682 3613 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 TOM1L1-203ENST00000536554 1522 ntTSL 2 BASIC8.5□□□□□ -1.05
SLC1A1P43005 AC004862.1-209ENST00000437763 1678 ntTSL 5 BASIC8.5□□□□□ -1.05
SLC1A1P43005 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC8.5□□□□□ -1.05
SLC1A1P43005 MRPL22-206ENST00000522038 3162 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
SLC1A1P43005 MAP3K20-201ENST00000338983 7179 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 LINC00689-203ENST00000438049 3946 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 RCBTB1-201ENST00000258646 3816 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
SLC1A1P43005 RN7SKP25-201ENST00000362449 308 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 C22orf15-202ENST00000382821 646 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 CAPN3-208ENST00000397204 1237 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 CCNYL3-201ENST00000407030 998 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 AKR1B1P8-201ENST00000418396 936 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 RPL10P5-201ENST00000427719 639 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 AL035417.1-201ENST00000442754 214 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 AC005840.2-201ENST00000447193 355 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 LINC01432-201ENST00000449427 677 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 AL591866.1-201ENST00000456162 401 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 NPSR1-208ENST00000465305 814 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 NUTF2P5-201ENST00000475013 379 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 AC068042.1-201ENST00000482222 1148 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 AC008481.2-201ENST00000483614 531 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 AC226119.2-201ENST00000513501 530 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 ASPH-206ENST00000517661 809 ntTSL 2 BASIC8.5□□□□□ -1.05
SLC1A1P43005 AAMDC-203ENST00000525034 511 ntTSL 3 BASIC8.5□□□□□ -1.05
SLC1A1P43005 AC109635.2-202ENST00000529219 500 ntTSL 3 BASIC8.5□□□□□ -1.05
SLC1A1P43005 SERPINA15P-201ENST00000529287 266 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 COL21A1-212ENST00000535941 3369 ntAPPRIS ALT1 TSL 5 BASIC8.5□□□□□ -1.05
SLC1A1P43005 AL358334.1-201ENST00000557152 174 ntTSL 5 BASIC8.5□□□□□ -1.05
SLC1A1P43005 AC027808.2-203ENST00000558261 638 ntTSL 5 BASIC8.5□□□□□ -1.05
SLC1A1P43005 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC8.5□□□□□ -1.05
SLC1A1P43005 ADGRF5P1-202ENST00000590130 980 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 AC104984.6-201ENST00000591928 360 ntTSL 3 BASIC8.5□□□□□ -1.05
SLC1A1P43005 ZNF677-208ENST00000599012 796 ntTSL 3 BASIC8.5□□□□□ -1.05
SLC1A1P43005 AC009093.6-201ENST00000622268 553 ntBASIC8.5□□□□□ -1.05
SLC1A1P43005 CU638689.4-208ENST00000623324 936 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 CU634019.6-203ENST00000624728 936 ntTSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 CCDC39-201ENST00000442201 3279 ntAPPRIS P1 TSL 2 BASIC8.5□□□□□ -1.05
SLC1A1P43005 GAN-202ENST00000568107 15244 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 INPP5B-205ENST00000373027 3905 ntTSL 2 BASIC8.5□□□□□ -1.05
SLC1A1P43005 MMADHC-202ENST00000422782 1462 ntTSL 5 BASIC8.5□□□□□ -1.05
SLC1A1P43005 ANP32E-203ENST00000436748 1339 ntTSL 2 BASIC8.5□□□□□ -1.05
SLC1A1P43005 DLG2-202ENST00000330014 2789 ntTSL 2 BASIC8.5□□□□□ -1.05
SLC1A1P43005 MAGEB18-201ENST00000325250 1811 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SLC1A1P43005 FANCM-201ENST00000267430 7111 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SLC1A1P43005 CHN2-208ENST00000412711 2991 ntTSL 2 BASIC8.49□□□□□ -1.05
SLC1A1P43005 THSD4-AS1-202ENST00000562634 2182 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SLC1A1P43005 CACYBP-209ENST00000613570 2835 ntTSL 2 BASIC8.49□□□□□ -1.05
SLC1A1P43005 FAM107A-202ENST00000394481 3465 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SLC1A1P43005 LINC00501-201ENST00000425388 2046 ntTSL 2 BASIC8.49□□□□□ -1.05
SLC1A1P43005 SLC26A9-202ENST00000367134 4616 ntTSL 5 BASIC8.49□□□□□ -1.05
SLC1A1P43005 VPS41-202ENST00000310301 5903 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SLC1A1P43005 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SLC1A1P43005 BCLAF1-223ENST00000628517 2512 ntTSL 5 BASIC8.49□□□□□ -1.05
SLC1A1P43005 ERV3-1-201ENST00000394323 2719 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
SLC1A1P43005 PDE4DIP-246ENST00000618462 8150 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SLC1A1P43005 UBE4B-202ENST00000343090 5267 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SLC1A1P43005 TOGARAM2-201ENST00000379558 12691 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SLC1A1P43005 TAS2R5-201ENST00000247883 1151 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 71.4 ms