RNA–Protein interactions for RNA: ENST00000541797.1

AC087894.2-201, humanhuman

TSL 4 BASIC

Gene AC087894.2, Length 462 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC087894.2-201ENST00000541797 AEBP2Q6ZN18 517 aaPredicted RBP30.98■■■□□ 2.55
AC087894.2-201ENST00000541797 CHIC1Q5VXU3 224 aa29.38■■■□□ 2.29
AC087894.2-201ENST00000541797 SENP3Q9H4L4 574 aaPredicted RBP26.41■■□□□ 1.82
AC087894.2-201ENST00000541797 PHF23Q9BUL5 403 aaPredicted RBP26.05■■□□□ 1.76
AC087894.2-201ENST00000541797 FOXD1Q16676 465 aa24.63■■□□□ 1.53
AC087894.2-201ENST00000541797 PLPPR3Q6T4P5 718 aa23.42■■□□□ 1.34
AC087894.2-201ENST00000541797 MSH5O43196 834 aa23.06■■□□□ 1.28
AC087894.2-201ENST00000541797 PPP6R1Q9UPN7 881 aa22.99■■□□□ 1.27
AC087894.2-201ENST00000541797 PIAS4Q8N2W9 510 aaPredicted RBP22.94■■□□□ 1.26
AC087894.2-201ENST00000541797 ADRA2BP18089 450 aa22.87■■□□□ 1.25
AC087894.2-201ENST00000541797 POTEDQ86YR6 584 aa22.59■■□□□ 1.21
AC087894.2-201ENST00000541797 MAPK8IP2Q13387 824 aaPredicted RBP21.02■□□□□ 0.96
AC087894.2-201ENST00000541797 DMRT2Q9Y5R5 561 aa20.96■□□□□ 0.95
AC087894.2-201ENST00000541797 SCAF1Q9H7N4 1312 aaKnown RBP20.92■□□□□ 0.94
AC087894.2-201ENST00000541797 PPP4R3CPQ6ZMV5 832 aa20.5■□□□□ 0.87
AC087894.2-201ENST00000541797 HOXD11P31277 338 aaPredicted RBP20.21■□□□□ 0.83
AC087894.2-201ENST00000541797 CNKSR2Q8WXI2 1034 aa20.15■□□□□ 0.82
AC087894.2-201ENST00000541797 RNF216Q9NWF9 866 aaPredicted RBP20.01■□□□□ 0.79
AC087894.2-201ENST00000541797 DCAF8L1A6NGE4 600 aa19.92■□□□□ 0.78
AC087894.2-201ENST00000541797 CACNB1Q02641 598 aaPredicted RBP19.73■□□□□ 0.75
AC087894.2-201ENST00000541797 RNF39Q9H2S5 420 aa19.71■□□□□ 0.75
AC087894.2-201ENST00000541797 NCBP3Q53F19 620 aaKnown RBP19.68■□□□□ 0.74
AC087894.2-201ENST00000541797 DNAJC5BQ9UF47 199 aa19.6■□□□□ 0.73
AC087894.2-201ENST00000541797 NPM3O75607 178 aaKnown RBP19.44■□□□□ 0.7
AC087894.2-201ENST00000541797 C1QBPQ07021 282 aaKnown RBP19.4■□□□□ 0.7
AC087894.2-201ENST00000541797 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.11■□□□□ 0.65
AC087894.2-201ENST00000541797 KCNA4P22459 653 aa19■□□□□ 0.63
AC087894.2-201ENST00000541797 U3KPZ7 1027 aaPredicted RBP18.8■□□□□ 0.6
AC087894.2-201ENST00000541797 SLC4A2P04920 1241 aa18.61■□□□□ 0.57
AC087894.2-201ENST00000541797 SPINK5Q9NQ38 1064 aaPredicted RBP18.5■□□□□ 0.55
AC087894.2-201ENST00000541797 DSG3P32926 999 aa18.42■□□□□ 0.54
AC087894.2-201ENST00000541797 CAPN15O75808 1086 aa18.41■□□□□ 0.54
AC087894.2-201ENST00000541797 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.22■□□□□ 0.51
AC087894.2-201ENST00000541797 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
AC087894.2-201ENST00000541797 APLP2Q06481 763 aa18.21■□□□□ 0.51
AC087894.2-201ENST00000541797 ZNF219Q9P2Y4 722 aaPredicted RBP18.14■□□□□ 0.49
AC087894.2-201ENST00000541797 SAMD1Q6SPF0 538 aaPredicted RBP18.11■□□□□ 0.49
AC087894.2-201ENST00000541797 TRHP20396 242 aaPredicted RBP18.08■□□□□ 0.48
AC087894.2-201ENST00000541797 ABCB7O75027 752 aa17.97■□□□□ 0.47
AC087894.2-201ENST00000541797 MYCNP04198 464 aaPredicted RBP17.97■□□□□ 0.47
AC087894.2-201ENST00000541797 SLC4A1APQ9BWU0 796 aaKnown RBP17.89■□□□□ 0.45
AC087894.2-201ENST00000541797 NISCHQ9Y2I1 1504 aa17.79■□□□□ 0.44
AC087894.2-201ENST00000541797 FOXD4L1Q9NU39 408 aa17.76■□□□□ 0.43
AC087894.2-201ENST00000541797 POTEHQ6S545 545 aa17.67■□□□□ 0.42
AC087894.2-201ENST00000541797 POLA2Q14181 598 aa17.64■□□□□ 0.41
AC087894.2-201ENST00000541797 ATF5Q9Y2D1 282 aaPredicted RBP17.56■□□□□ 0.4
AC087894.2-201ENST00000541797 RBM42Q9BTD8 480 aaKnown RBP17.54■□□□□ 0.4
AC087894.2-201ENST00000541797 ZBTB22O15209 634 aa17.51■□□□□ 0.39
AC087894.2-201ENST00000541797 ZBTB12Q9Y330 459 aaPredicted RBP17.31■□□□□ 0.36
AC087894.2-201ENST00000541797 ATXN8OSP0DMR3 200 aa17.27■□□□□ 0.36
AC087894.2-201ENST00000541797 CHRDL2Q6WN34 429 aa17.18■□□□□ 0.34
AC087894.2-201ENST00000541797 AKT1S1Q96B36 256 aa17.15■□□□□ 0.34
AC087894.2-201ENST00000541797 OSCARQ8IYS5 282 aa17.08■□□□□ 0.32
AC087894.2-201ENST00000541797 REM2Q8IYK8 340 aaPredicted RBP16.97■□□□□ 0.31
AC087894.2-201ENST00000541797 FBLN2P98095 1184 aa16.81■□□□□ 0.28
AC087894.2-201ENST00000541797 SPDYE2BA6NHP3 402 aa16.8■□□□□ 0.28
AC087894.2-201ENST00000541797 SPDYE6P0CI01 402 aa16.8■□□□□ 0.28
AC087894.2-201ENST00000541797 SPDYE2Q495Y8 402 aa16.8■□□□□ 0.28
AC087894.2-201ENST00000541797 PITPNM1O00562 1244 aa16.79■□□□□ 0.28
AC087894.2-201ENST00000541797 MKRN4PQ13434 485 aaPredicted RBP16.78■□□□□ 0.28
AC087894.2-201ENST00000541797 PIP4P2Q8N4L2 257 aa16.77■□□□□ 0.28
AC087894.2-201ENST00000541797 FXR2P51116 673 aaKnown RBP eCLIP16.71■□□□□ 0.27
AC087894.2-201ENST00000541797 CSRNP3Q8WYN3 585 aa16.64■□□□□ 0.25
AC087894.2-201ENST00000541797 SSUH2Q9Y2M2 353 aa16.61■□□□□ 0.25
AC087894.2-201ENST00000541797 SP7Q8TDD2 431 aaPredicted RBP16.55■□□□□ 0.24
AC087894.2-201ENST00000541797 ZNF692Q9BU19 519 aaPredicted RBP16.52■□□□□ 0.24
AC087894.2-201ENST00000541797 SPDYE1Q8NFV5 336 aaPredicted RBP16.48■□□□□ 0.23
AC087894.2-201ENST00000541797 HAX1O00165 279 aa16.39■□□□□ 0.21
AC087894.2-201ENST00000541797 CLEC11AQ9Y240 323 aa16.36■□□□□ 0.21
AC087894.2-201ENST00000541797 PRKAR2AP13861 404 aaKnown RBP16.32■□□□□ 0.2
AC087894.2-201ENST00000541797 EVX2Q03828 476 aa16.28■□□□□ 0.2
AC087894.2-201ENST00000541797 PABPN1Q86U42 306 aaKnown RBP eCLIP16.28■□□□□ 0.2
AC087894.2-201ENST00000541797 EHMT2Q96KQ7 1210 aa16.27■□□□□ 0.2
AC087894.2-201ENST00000541797 C19orf67A6NJJ6 358 aa16.16■□□□□ 0.18
AC087894.2-201ENST00000541797 PRR29P0C7W0 189 aa16.14■□□□□ 0.17
AC087894.2-201ENST00000541797 CHADLQ6NUI6 762 aa16.11■□□□□ 0.17
AC087894.2-201ENST00000541797 FARP1Q9Y4F1 1045 aaPredicted RBP15.92■□□□□ 0.14
AC087894.2-201ENST00000541797 GABBR2O75899 941 aa15.9■□□□□ 0.14
AC087894.2-201ENST00000541797 SPDYE4A6NLX3 237 aa15.89■□□□□ 0.13
AC087894.2-201ENST00000541797 STAG3Q9UJ98 1225 aa15.86■□□□□ 0.13
AC087894.2-201ENST00000541797 CD44P16070 742 aaKnown RBP15.8■□□□□ 0.12
AC087894.2-201ENST00000541797 CREBZFQ9NS37 354 aa15.79■□□□□ 0.12
AC087894.2-201ENST00000541797 CLCN6P51797 869 aa15.69■□□□□ 0.1
AC087894.2-201ENST00000541797 PROM2Q8N271 834 aa15.65■□□□□ 0.1
AC087894.2-201ENST00000541797 ZNF579Q8NAF0 562 aaKnown RBP15.62■□□□□ 0.09
AC087894.2-201ENST00000541797 POTEIP0CG38 1075 aa15.6■□□□□ 0.09
AC087894.2-201ENST00000541797 MNX1P50219 401 aaPredicted RBP15.58■□□□□ 0.08
AC087894.2-201ENST00000541797 ZRANB1Q9UGI0 708 aa15.55■□□□□ 0.08
AC087894.2-201ENST00000541797 LHX8Q68G74 356 aa15.5■□□□□ 0.07
AC087894.2-201ENST00000541797 CCDC180Q9P1Z9 1646 aa15.44■□□□□ 0.06
AC087894.2-201ENST00000541797 NPM1P06748 294 aaKnown RBP eCLIP15.44■□□□□ 0.06
AC087894.2-201ENST00000541797 GALR2O43603 387 aaPredicted RBP15.38■□□□□ 0.05
AC087894.2-201ENST00000541797 PAK3O75914 559 aaPredicted RBP15.38■□□□□ 0.05
AC087894.2-201ENST00000541797 DCBLD2Q96PD2 775 aa15.38■□□□□ 0.05
AC087894.2-201ENST00000541797 PHF12Q96QT6 1004 aa15.34■□□□□ 0.05
AC087894.2-201ENST00000541797 ABCC9O60706 1549 aa15.31■□□□□ 0.04
AC087894.2-201ENST00000541797 CCDC61Q9Y6R9 512 aa15.18■□□□□ 0.02
AC087894.2-201ENST00000541797 MS4A3Q96HJ5 214 aa15.16■□□□□ 0.02
AC087894.2-201ENST00000541797 ASTLQ6HA08 431 aaPredicted RBP15.13■□□□□ 0.01
AC087894.2-201ENST00000541797 PELP1Q8IZL8 1130 aaKnown RBP15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms