Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 AP002856.4-201ENST00000441638 569 ntTSL 4 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 OR7H1P-201ENST00000448965 922 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 IL20RB-AS1-201ENST00000462176 562 ntTSL 4 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AL122013.1-201ENST00000473054 801 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 EFCAB10-204ENST00000485614 799 ntTSL 5 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 RN7SL434P-201ENST00000495872 271 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AC012560.1-203ENST00000510550 595 ntTSL 4 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 LINC02428-203ENST00000513793 438 ntTSL 5 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AC087269.1-201ENST00000522213 666 ntTSL 2 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 HTATIP2-206ENST00000531058 1060 ntTSL 3 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 PRR13-205ENST00000549068 755 ntAPPRIS ALT2 TSL 5 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AC016954.1-201ENST00000549976 745 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 LINC01572-203ENST00000563823 563 ntTSL 4 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AL031722.1-201ENST00000570247 220 ntTSL 5 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 ZNF585A-205ENST00000588354 596 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 KIAA1328-209ENST00000592521 1190 ntTSL 2 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 ZNF493-205ENST00000596302 546 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 LINC02132-201ENST00000598933 750 ntTSL 2 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 SLC6A21P-201ENST00000599458 369 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AC010680.5-201ENST00000605021 463 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AC112219.2-201ENST00000608390 532 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AP003499.3-201ENST00000624680 857 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AP000280.1-201ENST00000624800 832 ntBASIC8.65□□□□□ -1.02
LMO3Q8TAP4 FLII-230ENST00000628188 156 ntTSL 5 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 C2orf83-204ENST00000641422 291 ntAPPRIS ALT2 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 ABCA4-207ENST00000536513 3740 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 TCF12-206ENST00000543579 1809 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 SLC37A3-202ENST00000340308 2955 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 TTC41P-204ENST00000548897 2998 ntTSL 5 BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 KCNS3-202ENST00000403915 2397 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 AGR2-203ENST00000419304 1778 ntAPPRIS P1 TSL 1 (best) BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 CCR3-208ENST00000545097 1786 ntTSL 1 (best) BASIC8.65□□□□□ -1.02
LMO3Q8TAP4 CEP57L1-202ENST00000368968 1649 ntAPPRIS ALT2 TSL 2 BASIC8.65□□□□□ -1.03
LMO3Q8TAP4 WDR31-203ENST00000374195 3101 ntAPPRIS P3 TSL 5 BASIC8.65□□□□□ -1.03
LMO3Q8TAP4 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC8.65□□□□□ -1.03
LMO3Q8TAP4 NLK-201ENST00000407008 4047 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 ZNF334-206ENST00000625284 2495 ntAPPRIS ALT2 TSL 2 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC114776.1-201ENST00000414159 4395 ntTSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 TANC2-201ENST00000389520 6404 ntTSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 RABGEF1-203ENST00000439720 3065 ntTSL 2 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 PSG9-204ENST00000418820 1748 ntTSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 IL31RA-206ENST00000447346 2577 ntAPPRIS P3 TSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 GLRX-201ENST00000237858 1211 ntAPPRIS P1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 Metazoa_SRP.2-201ENST00000359385 269 ntBASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AL080285.1-201ENST00000404225 984 ntBASIC8.64□□□□□ -1.03
LMO3Q8TAP4 RPL36P1-201ENST00000419720 225 ntBASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC105942.1-202ENST00000438509 952 ntTSL 3 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 LINC02022-201ENST00000448129 635 ntTSL 2 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 USP12-AS2-201ENST00000452222 279 ntTSL 3 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 SSR1-203ENST00000462112 1094 ntTSL 4 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC008592.1-201ENST00000503091 665 ntTSL 3 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC116337.3-201ENST00000505200 846 ntTSL 3 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 NR1I3-226ENST00000508740 977 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 GAPDHP44-201ENST00000513513 1007 ntBASIC8.64□□□□□ -1.03
LMO3Q8TAP4 RDH10-203ENST00000519380 978 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC006065.2-201ENST00000536978 211 ntBASIC8.64□□□□□ -1.03
LMO3Q8TAP4 MRPL40P1-201ENST00000542687 604 ntBASIC8.64□□□□□ -1.03
LMO3Q8TAP4 SERPINA9-208ENST00000546329 1156 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 MUCL1-202ENST00000546809 439 ntAPPRIS ALT2 TSL 3 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AL160314.2-202ENST00000553792 534 ntTSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 LRP1-AS-201ENST00000554476 325 ntTSL 3 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC009121.1-201ENST00000574681 1095 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 ZNF611-214ENST00000600943 560 ntTSL 4 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 AC243654.1-201ENST00000620218 293 ntTSL 2 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 LINC01206-228ENST00000628718 871 ntTSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 NFRKB-202ENST00000524746 4114 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 KLRC1-207ENST00000544822 1600 ntAPPRIS P4 TSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 GAPVD1-207ENST00000394105 5207 ntAPPRIS P3 TSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 ADAM3A-205ENST00000481351 2379 ntTSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 NYAP2-202ENST00000636099 5461 ntAPPRIS P1 TSL 5 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 GRIA2-201ENST00000264426 3445 ntAPPRIS ALT1 TSL 1 (best) BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 SUPT20H-205ENST00000464744 2625 ntAPPRIS P3 TSL 2 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 ERI2-215ENST00000569729 2646 ntTSL 2 BASIC8.64□□□□□ -1.03
LMO3Q8TAP4 FMO10P-201ENST00000455032 1493 ntBASIC8.64□□□□□ -1.03
LMO3Q8TAP4 RRN3-203ENST00000429751 2198 ntTSL 2 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 ZFHX3-201ENST00000268489 16064 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC007848.1-201ENST00000538430 1405 ntTSL 5 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 HERC2P5-201ENST00000562687 3825 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 AC107058.1-201ENST00000513297 1384 ntBASIC8.63□□□□□ -1.03
LMO3Q8TAP4 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 KIF23-202ENST00000352331 3351 ntAPPRIS ALT2 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 ZC3H11A-203ENST00000367212 3004 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 DCAF4L2-201ENST00000319675 3326 ntAPPRIS P1 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 LINC02026-201ENST00000397645 1615 ntTSL 2 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 ZNF234-204ENST00000592437 2292 ntAPPRIS P1 TSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 MARCH6-204ENST00000503788 2874 ntTSL 2 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 TAC1-203ENST00000350485 975 ntTSL 5 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 FAM177B-201ENST00000360827 764 ntAPPRIS P1 TSL 5 BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 NR1I3-206ENST00000367984 1059 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 MUC1-205ENST00000368389 543 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
LMO3Q8TAP4 MUC1-206ENST00000368390 804 ntTSL 1 (best) BASIC8.63□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms