Protein–RNA interactions for Protein: Q9Y6V7

DDX49, Probable ATP-dependent RNA helicase DDX49, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49Q9Y6V7 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.24■■□□□ 1.47
DDX49Q9Y6V7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 EEF1DP3-203ENST00000566025 782 ntBASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 AC142086.2-201ENST00000569753 217 ntBASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC24.23■■□□□ 1.47
DDX49Q9Y6V7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 PARP1-210ENST00000629232 477 ntTSL 5 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
DDX49Q9Y6V7 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 APTR-203ENST00000430801 583 ntTSL 5 BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 AC087289.5-201ENST00000586076 3175 ntBASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 AC112907.3-201ENST00000577781 2400 ntBASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC24.21■■□□□ 1.47
DDX49Q9Y6V7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC24.2■■□□□ 1.47
DDX49Q9Y6V7 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
DDX49Q9Y6V7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 FXN-202ENST00000396364 980 ntTSL 5 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
DDX49Q9Y6V7 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 BID-204ENST00000399767 2129 ntTSL 2 BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
DDX49Q9Y6V7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
DDX49Q9Y6V7 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC24.17■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms