Protein–RNA interactions for Protein: Q9Y5W9

SNX11, Sorting nexin-11, humanhuman

Predictions only

Length 270 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11Q9Y5W9 TSPY7P-201ENST00000431358 1114 ntBASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 BRWD1-AS2-201ENST00000603064 1028 ntBASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SNX11Q9Y5W9 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 AC239809.2-201ENST00000415381 517 ntBASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 AC005829.2-201ENST00000571422 1056 ntBASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.11■□□□□ 0.81
SNX11Q9Y5W9 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 AC133681.1-201ENST00000465482 601 ntBASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.1■□□□□ 0.81
SNX11Q9Y5W9 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 PGM5P4-201ENST00000421970 445 ntBASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SNX11Q9Y5W9 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 KRASP1-201ENST00000407852 552 ntBASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 FAM210CP-201ENST00000445714 574 ntBASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 BX088651.1-201ENST00000540551 451 ntBASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 AL356652.1-201ENST00000615962 565 ntBASIC20.08■□□□□ 0.81
SNX11Q9Y5W9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
SNX11Q9Y5W9 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC20.08■□□□□ 0.8
SNX11Q9Y5W9 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
SNX11Q9Y5W9 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 Z98882.1-201ENST00000622160 2253 ntBASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 KRT17P2-201ENST00000300992 1314 ntBASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.07■□□□□ 0.8
SNX11Q9Y5W9 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC20.07■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms