Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC19.62■□□□□ 0.73
PCDHGA11Q9Y5H2 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 PGM5P4-201ENST00000421970 445 ntBASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PCDHGA11Q9Y5H2 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 KRT8P36-201ENST00000489121 1440 ntBASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 GAS2L1P2-201ENST00000436355 1356 ntBASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 AFG3L1P-217ENST00000557444 2447 ntBASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 AC011767.1-201ENST00000617410 1153 ntBASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 PGPEP1L-202ENST00000535714 1483 ntTSL 2 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
PCDHGA11Q9Y5H2 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 DUX4L16-201ENST00000555130 1264 ntBASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 BID-214ENST00000617586 542 ntTSL 5 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
PCDHGA11Q9Y5H2 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.58■□□□□ 0.73
PCDHGA11Q9Y5H2 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
PCDHGA11Q9Y5H2 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
PCDHGA11Q9Y5H2 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC19.58■□□□□ 0.73
PCDHGA11Q9Y5H2 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC19.58■□□□□ 0.72
PCDHGA11Q9Y5H2 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms